Pairwise Alignments

Query, 248 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 265 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

 Score = 68.6 bits (166), Expect = 1e-16
 Identities = 59/227 (25%), Positives = 98/227 (43%), Gaps = 3/227 (1%)

Query: 6   VLMLFTTGFLSGVVNAIAGGGTFLTFGAMTLAGLPPIVANATSAIVQFPGYITSVIAYGP 65
           VL+L    F++G V++IAGGG         L G+PP VA     +V   G + ++  +  
Sbjct: 20  VLILGAIAFVAGFVDSIAGGGGLFLVPGFLLVGMPPQVALGQEKLVSTLGTLAAIRNFLA 79

Query: 66  EIRAHWREAVSLSVVSVVGGLAGSLLLLSLDNPAFRQLVPWLLLAATAVFAAGPWLRPKA 125
             +  W+ A+     S++G   G+ L++S+      +++  L+     +F   P  RP  
Sbjct: 80  NSKMVWQVALVGVPFSLLGAYLGAHLIVSISQETVGKIILALIPLGILIFLT-PKDRPVE 138

Query: 126 SAERSPGNLPSLVFQGLASI--YGGFFGAGMGIMMLAILGITSGGSYHHLNALKNLLSVV 183
             E S   L ++V     +I  Y GFFG G G M +              +A     +  
Sbjct: 139 ERELSSRMLFTVVPLTCLAIGFYDGFFGPGTGSMFIIAFHYLLRMDLVSSSANSKTFNFA 198

Query: 184 IAVIAITIFVSGGVVSWWAALIMFPAAALGGYVGVHTARRVPQWIIR 230
             + A+  FVS G V +  AL +     LG ++G   A R    ++R
Sbjct: 199 SNIGALVAFVSAGKVVYLLALPLVACNILGNHLGSSLALRKGNDVVR 245



 Score = 33.9 bits (76), Expect = 3e-06
 Identities = 16/60 (26%), Positives = 32/60 (53%)

Query: 177 KNLLSVVIAVIAITIFVSGGVVSWWAALIMFPAAALGGYVGVHTARRVPQWIIRWLVIAV 236
           + L+S +  + AI  F++   + W  AL+  P + LG Y+G H    + Q  +  +++A+
Sbjct: 62  EKLVSTLGTLAAIRNFLANSKMVWQVALVGVPFSLLGAYLGAHLIVSISQETVGKIILAL 121