Pairwise Alignments

Query, 523 a.a., signal recognition particle protein from Agrobacterium fabrum C58

Subject, 458 a.a., RNA-binding protein from Pseudomonas simiae WCS417

 Score =  437 bits (1125), Expect = e-127
 Identities = 237/467 (50%), Positives = 315/467 (67%), Gaps = 13/467 (2%)

Query: 1   MFENLQDRLGSILNGLTGRGALTEADVAAALREVRRALLEADVALEVVRSFTDRVREKAV 60
           MFENL DRL   L  +TG+  LTE ++   LREVR ALLEADVAL VV+ F + V+E+AV
Sbjct: 1   MFENLTDRLSQTLRHVTGKAKLTEDNIKDTLREVRMALLEADVALPVVKDFVNSVKERAV 60

Query: 61  GAAVLKSIKPGQMVVKIVHDELVEMLGTEGVSIDLHAAAPVVIMMVGLQGSGKTTTTGKI 120
           G  V +S+ PGQ  VKIV  EL  ++G     ++L A  P V++M GLQG+GKTTT GK+
Sbjct: 61  GTEVSRSLTPGQAFVKIVQAELESLMGAANEDLNLSAVPPAVVLMAGLQGAGKTTTAGKL 120

Query: 121 AKRLTDRDKKKVLMASLDTRRPAAQEQLRQLGVQTGVDTLPIIAGQSPTDIAARAVQAAK 180
           A+ L +R KK V++ S D  RPAA +QL  L  + GV   P    Q P DIA  A++ AK
Sbjct: 121 ARFLKERKKKSVMVVSADVYRPAAIKQLEMLAGEVGVTFFPSDLSQKPVDIANAAIKEAK 180

Query: 181 LGGHDVVILDTAGRTHIDEPLMLEMADIKKKSNPHEILLVADSLTGQDAVNLARNFDERV 240
           L   DVVI+DTAGR HIDE +M E+  +    NP E L V D++TGQDA N A+ F + +
Sbjct: 181 LKFIDVVIVDTAGRLHIDEEMMGEIKALHAAINPVETLFVVDAMTGQDAANTAKAFGDAL 240

Query: 241 GITGLVLTRMDGDGRGGAALSMRAVTGKPIKLIGIGERMNELDEFHPRRIADRILGMGDI 300
            +TG++LT++DGD RGGAALS+RA+TGKPIK IG+GE+ + L+ FHP RIA RILGMGD+
Sbjct: 241 PLTGVILTKVDGDARGGAALSVRAITGKPIKFIGMGEKSDALEPFHPERIASRILGMGDV 300

Query: 301 VSLVEKAAENIDAEKARSMAEKMAKGK-FDLNDLADQLGQMKKMGGMGGIMGLMPGMAGM 359
           +SL+E+A   +D +KA  +A+K+ KGK FDL D  DQL QMK MGG+GG+M  +P + G+
Sbjct: 301 LSLIEQAEATLDKDKADKLAKKLKKGKGFDLEDFRDQLQQMKNMGGLGGLMDKLPNIGGV 360

Query: 360 K-DKMASA-GMNDKMFDRQIAIISSMTKAERANPDILKHSRKKRIAAGSGTDAAEINKLL 417
              +M +A G  +K F +  AII+SMT AER +P+++  SRK+RIA GSGT   +I +L+
Sbjct: 361 NLAQMGNAQGAAEKQFKQMEAIINSMTPAERRDPELISGSRKRRIAMGSGTQVQDIGRLI 420

Query: 418 KMHRGMADMMKAMGGKGKGGIMKQMMGGLAGKMGLGGMM-GGGMPDL 463
           K H+ M  MMK      KGG+ K M        G+GGM+ GGGMP +
Sbjct: 421 KQHKQMQKMMKKF--SAKGGMAKMM-------RGMGGMLPGGGMPKM 458