Pairwise Alignments

Query, 390 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 381 a.a., Dual-specificity RNA methyltransferase RlmN from Pseudomonas putida KT2440

 Score =  330 bits (847), Expect = 3e-95
 Identities = 183/376 (48%), Positives = 235/376 (62%), Gaps = 21/376 (5%)

Query: 2   SGKPSLIGLTREEMGEALAEIGVPQKQVKMRVSQLWNWLYVRGVSDFDNMTNVAKELREK 61
           +GK +L+GLT+ EM +    IG    + + R  Q+  W++  GVSDF  MTNV K LREK
Sbjct: 5   TGKINLLGLTQPEMEQFFDSIG----EKRFRAGQVMKWIHHFGVSDFAAMTNVGKVLREK 60

Query: 62  LKAAFTIARPEIVEEQISNDGTRKWLMRFPPRGAGRPVEIETVYIPEEGRGTLCISSQVG 121
           L+A   I  PE+V E IS DGTRKW++R           +ETVYIP + RGTLC+SSQ G
Sbjct: 61  LEAVAEIRPPEVVSEDISADGTRKWVIRVASGSC-----VETVYIPTDDRGTLCVSSQAG 115

Query: 122 CSLTCSFCHTGTQRLVRNLTAEEILSQLLLARDRLGDFPDGSTPVGAYVPSEGRKVSNIV 181
           C+L CSFC TG Q    NLTA E++ Q+ LA    G  P              R ++N+V
Sbjct: 116 CALDCSFCSTGKQGFNSNLTAAEVIGQVWLANKSFGTVP----------AKVDRAITNVV 165

Query: 182 MMGMGEPLYNFEHVKTALLIATDGDGLSLSKRRVTLSTSGVVPEIFRTGDEIGVMLAISL 241
           MMGMGEPL NF++V  A+ I  D  G  +SKRRVTLSTSGVVP I      I V LA+SL
Sbjct: 166 MMGMGEPLLNFDNVIAAMKIMMDDLGYGISKRRVTLSTSGVVPMIDELAKHIDVSLALSL 225

Query: 242 HAVRDDLRDMLVPINKKYPLKELIEACRNYPGVSNARRI-TFEYVMLKDVNDSLEDAKML 300
           HA  D+LR+ LVPINKKYPLK L+E+C  Y      +R+ T EY +LKDVND  E A  +
Sbjct: 226 HAPNDELRNKLVPINKKYPLKVLLESCMGYMSTLGGKRVLTVEYTLLKDVNDQPEHAAQM 285

Query: 301 VQLLKGVPAKINLIPFNPWPGTNYQCSEWAQIEKFADFINQAGYASPIRTPRGRDILAAC 360
           ++LL+ VP KINLIPFNP+P + Y+      I +F D ++  G+    RT RG DI AAC
Sbjct: 286 IELLRDVPCKINLIPFNPFPHSGYERPSNNAIRRFQDLLHHGGFNVTTRTTRGDDIDAAC 345

Query: 361 GQLKSE-SERMRKTER 375
           GQL  + ++R R++ER
Sbjct: 346 GQLVGQVNDRTRRSER 361