Pairwise Alignments

Query, 215 a.a., RhtB family transporter from Agrobacterium fabrum C58

Subject, 204 a.a., lysine transporter LysE from Pseudomonas simiae WCS417

 Score = 87.8 bits (216), Expect = 1e-22
 Identities = 57/203 (28%), Positives = 101/203 (49%), Gaps = 7/203 (3%)

Query: 13  FTIAILLLAVTPGPDMTLWISRSLREGRAAGFMTLVGTNIGITVHTMLVAFGVAALIVAS 72
           F I  L++ + PG  +   +S  L  G+ A     +G   GI  H +    G++AL+  S
Sbjct: 6   FLITCLIVVLIPGTGVIFTVSTGLTAGKRASVFAALGCTAGIIPHLLASVLGLSALLHTS 65

Query: 73  PTAFMILKTGGAAYLVWLAIQAIRKGSDFVMVKSTGEKAQASLKSALLNGIWVNLLNPKV 132
             AF +LK  G AYL++++    R  S F + ++      +S +S +L G+ +N+LNPK+
Sbjct: 66  ALAFDMLKYAGVAYLLYVSYATWRDRSAFAVSETP---TLSSARSLMLRGLLMNILNPKL 122

Query: 133 IIFFMTFLPQFVSATDPHVTGKLIFLGIWSIIVALPIGIGIV--VTADILSAWLQRNRKV 190
            IFF+ FLPQFV  T       L  L + ++ + +   + +V  + A++    +  + +V
Sbjct: 123 TIFFLAFLPQFV--TPGSTAPALQMLVLSAVFMGMTFAVFVVYGLLANVFRRAVIESPRV 180

Query: 191 LRGLDYTIAGVFSLFAVKIFFTQ 213
              L  + A  F+   + + F Q
Sbjct: 181 QNWLRRSFAAAFAGLGLNLAFAQ 203