Pairwise Alignments

Query, 613 a.a., succinate dehydrogenase flavoprotein subunit from Agrobacterium fabrum C58

Subject, 596 a.a., succinate dehydrogenase subunit A (EC 1.3.5.1) from Enterobacter asburiae PDN3

 Score =  405 bits (1040), Expect = e-117
 Identities = 248/588 (42%), Positives = 339/588 (57%), Gaps = 42/588 (7%)

Query: 22  DVIVVGAGGAGLRATLGMAEQG--FRTACITKVFPTRSHTVAAQGGIAASLTNMTPDCWQ 79
           D+ V+GAGGAGLRA +  A+     + A I+KV+P RSHTVAA+GG AA   +   D ++
Sbjct: 7   DLAVIGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSHTVAAEGGSAAVAQDH--DSFE 64

Query: 80  WHLYDTVKGSDWLGDVDAMQYLAMEAPKAVYELEHYGVPFSRNAEGKIYQRPFGGHMQNY 139
           +H +DTV G DWL + D + Y     P  + +LE +G P+SR  +G +  R FGG     
Sbjct: 65  YHFHDTVAGGDWLCEQDVVDYFVHHCPTEMTQLEQWGCPWSRRPDGSVNVRRFGGMK--- 121

Query: 140 GEGPPVQRTCAAADRTGHAILHTLYGQSLR-NNAEFFIEYFALDLIMAPDGRCTGVVAWN 198
                ++RT  AAD+TG  +LHTL+  SL+    + F E+F LD I+  DG+  G+VA N
Sbjct: 122 -----IERTWFAADKTGFHMLHTLFQTSLQFPQIQRFDEHFVLD-ILVDDGQARGLVAMN 175

Query: 199 LDDGTIHRFSAKMVVLATGGYGRAYFSATSAHTCTGDGGGMIARAGLPLQDMEFVQFHPT 258
           + +GT+ +  A  VV+ATGG GR Y   T+    TGDG GM    G+PL+DMEFVQ+HPT
Sbjct: 176 MMEGTLVQIRANAVVMATGGAGRVYRYNTNGGIVTGDGMGMALGHGVPLRDMEFVQYHPT 235

Query: 259 GIYGAGCLITEGARGEGGYLVNSEGERFMERYA---------PSAK--DLASRDVVSRCM 307
           G+ G+G L+TEG RGEGG LVN  G R+++ Y          P  K  +L  RD VS+  
Sbjct: 236 GLPGSGILMTEGCRGEGGILVNKNGYRYLQDYGMGPETPLGEPKNKYMELGPRDKVSQAF 295

Query: 308 TMEIREGRGVGKNK-DHIFLHLDHLDPAILHERLPGISESAKIFAGVDVTREPIPVLPTV 366
             E R+G  +   + D ++L L HL    L ERLP I E AK + GVD  +EPIPV PT 
Sbjct: 296 WHEWRKGNTISTPRGDVVYLDLRHLGEKKLLERLPFICELAKAYVGVDPVKEPIPVRPTA 355

Query: 367 HYNMGGIPTNYWGEVLNADANNPERIAPGLMAVGEAGCASVHGANRLGSNSLIDLVVFGR 426
           HY MGGI T+             E    GL AVGE     +HGANRLGSNSL +LVVFGR
Sbjct: 356 HYTMGGIETD----------QQCETRIKGLFAVGECSSVGLHGANRLGSNSLAELVVFGR 405

Query: 427 AAAIRAAQ--VIDRDAPVPALDIAACDKIMERFDSLRYANGSTPTAVLRDKMQRAMQDDA 484
            A  RA +      +A   ALD    D + +R   L    G+   + +RD+M  +M++  
Sbjct: 406 MAGERAMERAATSGEANGAALDAQVAD-VEKRLKDLVNQEGNENWSKIRDEMGLSMEEGC 464

Query: 485 AVFRTQESLESGCQRLSAIWKELPDVKVTDRSMVWNSDLVETLELHNLMANAITTVYGAE 544
            ++RT E ++    +L+ + +    V++TD S V+N+DL+ T+EL + +  A    + A 
Sbjct: 465 GIYRTPELMQKTVDKLAELQERFKRVRITDTSSVFNTDLLYTIELGHGLNVAECMAHSAL 524

Query: 545 ARKESRGSHAREDFVDGPFGGRDDVNWRKHTLAWVSPEGDVKLDYRPV 592
           ARKESRG+H R   +D     RDDVN+ KHTLAW    G  +LDY  V
Sbjct: 525 ARKESRGAHQR---LDEGCTERDDVNFLKHTLAWRDANGTTRLDYSDV 569