Pairwise Alignments

Query, 315 a.a., site-specific recombinase from Agrobacterium fabrum C58

Subject, 299 a.a., Tyrosine recombinase XerC from Pseudomonas putida KT2440

 Score =  169 bits (427), Expect = 1e-46
 Identities = 98/295 (33%), Positives = 158/295 (53%), Gaps = 9/295 (3%)

Query: 21  QSWLATLAGERRLADNTVEAYERDTRQFLRFLTGYIGRPAAIRDIADLRPVDLRAFLANR 80
           +++ A L  ER+++++T + Y RD  + + +   +      I D   L+   LR  +A  
Sbjct: 6   EAYCAHLRNERQVSEHTSQGYRRDLEKVIAYCEEH-----GIADWQALQIQQLRQLIARL 60

Query: 81  RKEGAGARSLGRHLAGLRSLLHHLQKKGLVNAAGATAMRAPKQPKSLPKPLTDRQALKIT 140
              G   RSL R L+ +R L  +L ++GL     A  + APK  + LPK L   +AL++ 
Sbjct: 61  HHHGQSPRSLARLLSAVRGLYRYLNREGLCQHDPANGLSAPKGERRLPKVLDTDRALQLL 120

Query: 141 TAEAQLNEEPWIAARNAAVLSLLYGCGLRISEALGLTPADFPPGTRSLRITGKGNKTRIV 200
                  ++ +IA R+ A+L L Y  GLR+SE   L           +++ GKG K R++
Sbjct: 121 DGGV---DDDFIARRDQAILELFYSSGLRLSELTNLDLDHLDLAAGLVQVLGKGGKARVL 177

Query: 201 PLLAVVTEAVDTYRKLCPYALAADEPMFLGARGGKLQPAIIQREMQKLRGAFGLPENATP 260
           P+     EA+  + +L       D  +F+  +G ++ P  ++  + K+ G   L ++  P
Sbjct: 178 PVGRKAREALQAWYRLRGIGNPRDRAVFITRQGNRISPRAVRLRV-KVAGERELGQHLHP 236

Query: 261 HALRHSFATHLLAGGGDLRTIQELLGHASLSTTQVYTGVDTARLLEIYDNAHPRA 315
           H LRHSFA+H+L    DLR +QE+LGHA +STTQ+YT +D   L  +YD+AHPRA
Sbjct: 237 HMLRHSFASHVLESSQDLRAVQEMLGHADISTTQIYTHLDFQHLAAVYDSAHPRA 291