Pairwise Alignments

Query, 641 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 787 a.a., outer membrane protein assembly factor from Pseudomonas putida KT2440

 Score = 78.6 bits (192), Expect = 1e-18
 Identities = 122/573 (21%), Positives = 200/573 (34%), Gaps = 72/573 (12%)

Query: 123 GIVNVTVAGKNVDDLPPNPVFDHSTPVPMVITVTPGPKFTLGNVRLEGD--VTGRNLDEY 180
           G +N+ +A   V   P          V + + +  G K+T+ +V+L GD  V    +   
Sbjct: 233 GYINMDIASTQVSITPDKK------HVYITVNINEGEKYTVRDVKLSGDLKVPEDQVKSL 286

Query: 181 GLIAGGDAGSLAIIRAGNKLIDD-LKAEGRPLAKLTKREAVANHATNTVDITMAAEGGPV 239
            L+  G   S  ++   ++LI   L  EG   A +       N   +TVDI    + G  
Sbjct: 287 LLVQPGQVFSRKVMTTTSELITRRLGNEGYTFANVNGVPQ-PNDQDHTVDIMFVVDPGKR 345

Query: 240 APLGAVTVTGEKTVDGDFIRRYSRLNGGEPYSPEKLRKAADRLRQLGVFSSLTIKEAGTL 299
           A +  +   G    + + +RR  R   G   S   + ++  RL +LG F  + ++     
Sbjct: 346 AYVNRINYRGNTKTEDEVLRREMRQMEGGWASTYLIDQSKTRLERLGFFKEVNVETPQVP 405

Query: 300 ARDGTIPLTIEVSEGKHRYFGVGAQYSTTEGIGLQGYWGHRNLFGQAESLRIEGSVSRIA 359
             D  + +   V E           ++ + G+ L G     N  G        G+   I 
Sbjct: 406 GTDDQVDVNYSVEEQASGSITASVGFAQSAGLILGGSISQSNFLG-------TGNKVSIG 458

Query: 360 EASSVEGMDYSAGIT---FTKPGMFNPRTTFKTSLIAKTENPD---TYRAKTLTGTAGFA 413
              S     Y+ G     FT  G+      F  S        D    Y   +      F 
Sbjct: 459 LTRSEYQTKYNFGFVDPYFTADGVSLGYNLFYNSTDYSDYYDDGVSYYAINSYGAGVSFG 518

Query: 414 YELNDTDTAAAGLEVQWADTEDAFGKNEYLTTSIPLE------------FVRDTRDDKLN 461
           Y +N+T     GL +Q  D        + +   I  E            +   T +  + 
Sbjct: 519 YPINETSRLTYGLTLQHDDISPGTYSADEIYDFISREGKSFNNLKASIGWSESTLNKGVL 578

Query: 462 PTEGFRASLAAKPSYEALNGTFFS-SFEGSITGYKGLGAEDRLIMAGKLSGGVLVGGSDL 520
            T G   SL    +    + +F+   + G    +  + +   L +   L  G   G +D 
Sbjct: 579 ATRGHSQSLTLMATTPGSDLSFYKLDYNGQ--AFLPVTSNTTLRLHTNLGYGNGYGSTD- 635

Query: 521 QDIPTTRRFFAGGGGSVRGYSYQEISP--------YNAAG---------DATGGRSYVVG 563
             +P    + AGG GSVRG+    + P        Y+ AG         D  GG   + G
Sbjct: 636 -GLPFYESYNAGGQGSVRGFKDGTLGPRSTPATGAYSNAGQAYYSDRDTDVLGGNILITG 694

Query: 564 SVE-----ARIKVTDTIGLVPFFDAGVVSDGV----------TPDFSDIRAGAGIGLRYA 608
             E       +K    +    F DAG V              + D + +    G+G+ + 
Sbjct: 695 GAEYLFPLPFVKDQSQLRSSVFVDAGNVYADTCYLSTTQGCGSVDLAQMAVSLGVGVTWY 754

Query: 609 TPFGPLRLDVAMPLEKYDGGNNFGIYAGIGQSF 641
           +P GPL   +A PL+K D          +GQ+F
Sbjct: 755 SPMGPLSFSLAAPLKKPDNAETQVFQFSLGQTF 787