Pairwise Alignments

Query, 308 a.a., transcriptional regulator, ROK family from Agrobacterium fabrum C58

Subject, 302 a.a., possible NAGC-like transcriptional regulator (VIMSS) from Escherichia coli BW25113

 Score =  115 bits (289), Expect = 1e-30
 Identities = 74/270 (27%), Positives = 121/270 (44%), Gaps = 4/270 (1%)

Query: 1   MIVCFDIGGTTIKGAIAHTPDDIRPVPRIPTPKTSFEDFAAGLKSVIDASG---GTPGCV 57
           M +  D+GGT  +        +     R+PTP+  +      + +++D +    G  G V
Sbjct: 1   MRIGIDLGGTKTEVIALGDAGEQLYRHRLPTPRDDYRQTIETIATLVDMAEQATGQRGTV 60

Query: 58  SLSIAGVIDPDTGKATVANIPSIHGRVLKDELEKALNLPVIVSNDADCFVIAESEIGSGQ 117
            + I G I P TG    AN   ++G+    +L   L   V ++NDA+C  ++E+  G+  
Sbjct: 61  GMGIPGSISPYTGVVKNANSTWLNGQPFDKDLSARLQREVRLANDANCLAVSEAVDGAAA 120

Query: 118 GHRVVFGVILGTGVGGGLVIDGKLINSHGGFAGEWGHGPVAATSAGNPPVSLPRFECGCG 177
           G + VF VI+GTG G G+  +G+      G AGEWGH P+                C CG
Sbjct: 121 GAQTVFAVIIGTGCGAGVAFNGRAHIGGNGTAGEWGHNPLPWMDEDELRYR-EEVPCYCG 179

Query: 178 LTGCVDAIGSARGMEKLHAHLHRQEMTSEDIIAAWQAGDAKAARTIDVLIDILASPLAMV 237
             GC++   S  G    +  L    +   +II   +  D  A   +      LA  LA V
Sbjct: 180 KQGCIETFISGTGFAMDYRRLSGHALKGSEIIRLVEESDPVAELALRRYELRLAKSLAHV 239

Query: 238 INVTGATIVPVGGGLSNSRELLAALDEAVR 267
           +N+    ++ +GGG+SN   L   + + ++
Sbjct: 240 VNILDPDVIVLGGGMSNVDRLYQTVGQLIK 269