Pairwise Alignments

Query, 410 a.a., ABC transporter, substrate binding protein (maltose) from Agrobacterium fabrum C58

Subject, 439 a.a., sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB from Dickeya dadantii 3937

 Score = 82.4 bits (202), Expect = 2e-20
 Identities = 93/356 (26%), Positives = 144/356 (40%), Gaps = 61/356 (17%)

Query: 83  GTPVSMAYVGSRTLKQFAQNDLIVPVPMTEDEKKTYYPNIVDTVTFEDTQWG----VPVA 138
           GT   MA   S+ +K   Q      VP  E   K + P +  +  + D + G     P  
Sbjct: 93  GTATMMA---SKAIKPVYQVFKDAGVPYDE---KIFVPTV--SGYYSDAKTGHLLSQPFN 144

Query: 139 FSTKALYWNKDLFKQAGLDPETPPKTWAEEIAFAKQIKEKTGIAGYGLPAKTFDNTMHQF 198
            ST  LY+NKD FK+AGLDPE PPKTW +   +  +++      GY    + +   +  F
Sbjct: 145 SSTPVLYYNKDAFKKAGLDPEQPPKTWQQMAEYTAKLRASGMKCGYASGWQGWIQ-IENF 203

Query: 199 MHW-----VYTNNG-----KVIDGDK-ITVDSPQVLAALKAYKDITPYSVEGPTAYEQNE 247
             W        NNG      V++ +K + V   Q+L  +    D T Y         ++E
Sbjct: 204 SAWHGLPIATKNNGFDGLDAVLEFNKPVQVKHIQMLEDMNKKGDFTYYG-------RKDE 256

Query: 248 IRAIFLDGKVGMIQAGSGAATRL-QATKINWGIATLPLGPEAKGPGTLLITDSLAIF--- 303
               F +G   M  A SG+   + Q  K N+G+A +P   + KG     I    +++   
Sbjct: 257 PTEKFYNGDCAMTTASSGSLANIRQYAKFNYGVAMMPYDADVKGAPQNAIIGGASLWVMN 316

Query: 304 -KGTGVEEKATEFAKFITSPGPQGE--------------YELQGGAGLTPLRPSPKV--D 346
            K     +   EF +F+++P    E              YEL    G     P   +   
Sbjct: 317 GKDAATYKGVAEFMQFLSTPEIAAEWHQKTGYLPITTAAYELTKQQGFYDKNPGADIATR 376

Query: 347 EFIAKDPFWKPLIDGIAYGGPEPLFTDYKGFQDVMIEMVQSVVTGKATPEDAAKKA 402
           + + K+P   P   G+  G    + T       ++ E ++SV TGK TP+ A   A
Sbjct: 377 QMLNKEPL--PFTKGLRLGNMPQIRT-------IVDEELESVWTGKKTPQQALDAA 423