Pairwise Alignments

Query, 391 a.a., ABC transporter, membrane spanning protein (oligopeptide) from Agrobacterium fabrum C58

Subject, 308 a.a., dipeptide ABC transporter - putative membrane subunit from Pseudomonas putida KT2440

 Score =  160 bits (405), Expect = 5e-44
 Identities = 95/232 (40%), Positives = 139/232 (59%), Gaps = 10/232 (4%)

Query: 160 EGGE-MFLLGTDRLGRDVLSRIIYGARISLTIGLLGVAMSFVLGIVIGGLAGYRGGTFDL 218
           EGG   F+LGTD LGRD+LSR+I GAR+SL IGL  V MS + GI++G LAG+       
Sbjct: 79  EGGTWQFILGTDELGRDLLSRLIQGARLSLLIGLSSVVMSLIPGILLGLLAGFFPQLLGP 138

Query: 219 IVQRIIEVLQSIPSIPLWLALAAIMPVTWSPILVYLGITIILGMLDWTGLARAVRSKLLA 278
            + R+++V+ ++PS+ L +A+ AI+     P L+     I + ++      R  R+ ++ 
Sbjct: 139 SIMRLMDVMLALPSLLLAVAIVAIL----GPGLI--NTVIAIAIVSLPSYVRLTRAAVMG 192

Query: 279 LREEDYVLSAQLMGAGTPRIIGRHLIPGFMSHLIASATLTIPGMILGETALSFLGLGLRP 338
               DYV +A+L GAG PR++   ++P  M+ LI  ATL+    IL   AL FLGLG++P
Sbjct: 193 ELNRDYVTAARLAGAGLPRLMFVTVLPNCMAPLIVQATLSFSSAILDAAALGFLGLGVQP 252

Query: 339 PITSWGILLTEARSVSVIALYPWLL-IPTIPVVLVILAFNFFGDGLRDAADP 389
           P   WG +L  AR    I    W++ +P + ++L +LA N  GDGLRDA DP
Sbjct: 253 PTPEWGTMLASAR--DYIERAWWVVSLPGLTILLSVLAINLMGDGLRDALDP 302