Pairwise Alignments

Query, 391 a.a., ABC transporter, membrane spanning protein (oligopeptide) from Agrobacterium fabrum C58

Subject, 338 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  175 bits (444), Expect = 2e-48
 Identities = 97/241 (40%), Positives = 149/241 (61%), Gaps = 9/241 (3%)

Query: 150 EGRTHFVCPAEGGEMFLLGTDRLGRDVLSRIIYGARISLTIGLLGVAMSFVLGIVIGGLA 209
           EGRT  +      E F  GTD  GRD+L+R++ G +IS+ +G+L   +S  +G++ G  A
Sbjct: 103 EGRTLKLEGDVNREYFFFGTDSNGRDMLARVMLGGQISIAVGILASLVSLGIGVLYGATA 162

Query: 210 GYRGGTFDLIVQRIIEVLQSIPSIPLWLALAAIMPVTWSPILVYLGITIILGMLDWTGLA 269
           GY GG  D ++ R +E+L S+P + L + L      ++  IL++L    ++G ++W  +A
Sbjct: 163 GYIGGRVDNVMMRFVEILYSLPFVFLVVVLVVFFGRSF--ILIFL----VIGAVEWLDMA 216

Query: 270 RAVRSKLLALREEDYVLSAQLMGAGTPRIIGRHLIPGFMSHLIASATLTIPGMILGETAL 329
           R VR + LAL+  ++V +AQ +G    +II RH+IP  +  ++   T+ +P +IL E+ L
Sbjct: 217 RIVRGQTLALKRREFVGAAQALGLSDWQIIRRHIIPNTIGPVVVFVTVVVPKVILLESFL 276

Query: 330 SFLGLGLRPPITSWGILLTEARSVSVIALYPWLLI-PTIPVVLVILAFNFFGDGLRDAAD 388
           SFLGLG++ P+TSWG L++E    + I   PWLLI P I  VL + + NF GDGLRDA D
Sbjct: 277 SFLGLGVQAPLTSWGALISE--GANNIQSAPWLLIFPAIFFVLTLFSLNFVGDGLRDALD 334

Query: 389 P 389
           P
Sbjct: 335 P 335