Pairwise Alignments

Query, 391 a.a., ABC transporter, membrane spanning protein (oligopeptide) from Agrobacterium fabrum C58

Subject, 295 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  152 bits (384), Expect = 1e-41
 Identities = 84/230 (36%), Positives = 132/230 (57%), Gaps = 11/230 (4%)

Query: 162 GEMFLLGTDRLGRDVLSRIIYGARISLTIGLLGVAMSFVLGIVIGGLAGYRGGTFDLIVQ 221
           G   + GTD LGRD+ SR+++GARI+LTI  L   +   +G+++G  +GY GG FD ++ 
Sbjct: 69  GNGHVFGTDELGRDIYSRLLWGARITLTIISLVSIIVGPVGLLVGTASGYLGGKFDTVMM 128

Query: 222 RIIEVLQSIPSIPLWLALAAIMPVTWSPILVYLGITIILGMLDWTGLARAVRSKLLALRE 281
           RI ++  S PS+ L LA  A +  + +  ++ + +T       W  +AR  R++ +  R+
Sbjct: 129 RITDIFLSFPSLILSLAFVAALGPSLNNAIIAIALT------SWPPIARLARAEAMTFRK 182

Query: 282 EDYVLSAQLMGAGTPRIIGRHLIPGFMSHLIASATLTIPGMILGETALSFLGLGLRPPIT 341
            DY+ +A+L GA   RII + ++P  +  ++   TL +  +IL    L FLGLG +PP+ 
Sbjct: 183 ADYIAAARLQGASPLRIIVKSIMPMCLPSVLIRLTLNMATVILTAAGLGFLGLGAQPPLP 242

Query: 342 SWGILLTEARSVSVIALYPWLLI--PTIPVVLVILAFNFFGDGLRDAADP 389
            WG ++   R      L  W L+  P + ++ V LAFN  GDGLRDA DP
Sbjct: 243 EWGAMIATGRR---YMLDSWWLVTFPGVAILSVSLAFNLLGDGLRDALDP 289