Pairwise Alignments

Query, 633 a.a., ABC transporter, substrate binding protein (oligopeptide) from Agrobacterium fabrum C58

Subject, 541 a.a., dipeptide ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

 Score = 51.6 bits (122), Expect = 9e-11
 Identities = 99/435 (22%), Positives = 172/435 (39%), Gaps = 88/435 (20%)

Query: 101 PDILESYEVQEE-RIFTFKLREGHKWSDGSDFTSEDFRYFWEDV--ALNKEIHKGGP--- 154
           P +   +EV ++ + +TF LREG K+   +D+      +  +DV    N+ + K  P   
Sbjct: 73  PGLATKWEVSDDGKTYTFHLREGVKFHT-TDYFKPSRPFNADDVLFTFNRMLDKDNPFRK 131

Query: 155 --PIE------LLVNNNPPLIEVVDRLTVRYTWEGPNPDFLAKLAAASPARLFLPAAYMK 206
             P E      + ++ N   +E +D  TV++T    +  F+  LA +             
Sbjct: 132 AYPTEFPYFTDMGMDKNIAKVEKLDEHTVKFTLNEVDAAFIQNLAMS------------- 178

Query: 207 QFHVKYQTAENLAKLIKKNKADDWSGLHIKMSRQVRPENPALPTLDAWRNTTSPPAEQFV 266
                 Q+AE   +L+K  KA D +   I     V  +       DA          Q  
Sbjct: 179 --FASIQSAEYADQLLKNGKAADINQKPIGTGPFVFSKYQK----DA----------QIR 222

Query: 267 FERNPYYHRVDENGLQLPYLDRFLLNVTS-SDIISAKTASGDSDLQYFGLDFADYTFLK- 324
           F+ N  Y + ++       +D  +  +T+ + +   K    +  +  F    AD   LK 
Sbjct: 223 FKGNKDYWQPED-----VKIDNLIFAITTDASVRMQKLKKNECQVTLFPRP-ADIEPLKA 276

Query: 325 DAEKRFP---------LKVNLYKRSQGSRIALLPNLNCADPVWRTAFQDVRVRRALSLAI 375
           D   + P         +  N+  + +GS        N A+P+       ++VR+AL +A+
Sbjct: 277 DKNLQMPQQAGFNLGYIAYNVMDKIKGS--------NEANPM-----AQLKVRQALDMAV 323

Query: 376 NRHEINMVCFYGLAKESADTVLPESPLYRQEFADAWSAFDRAAANRLLDEAGFDKRDNAG 435
           ++ +I    + G  + + + + P    Y     DA  AFD   A +LL EAG  +     
Sbjct: 324 DKKKIIESVYQGAGQLAVNAMPPTQWSYDDSIKDA--AFDPEKAKQLLKEAGIKEGTEIT 381

Query: 436 LRLLPDGRPAYIIVETTGESTLETDVMELVTDHWRHIGIAVSVRPTQRDVFRKRAMGGE- 494
           L  +P  RP     +          + E++   W  IGI   +   +   + KR+ GGE 
Sbjct: 382 LWAMPVQRPYNPNAKL---------MAEMLQSDWAKIGIKAKIVSYEWGEYIKRSKGGEQ 432

Query: 495 -VLMSVWMGMDNGVP 508
             ++  W G DNG P
Sbjct: 433 GAMLIGWSG-DNGDP 446