Pairwise Alignments

Query, 630 a.a., ABC transporter, nucleotide binding/ATPase protein (oligopeptide) from Agrobacterium fabrum C58

Subject, 565 a.a., ABC transporter ATP-binding protein from Dickeya dianthicola ME23

 Score =  448 bits (1152), Expect = e-130
 Identities = 268/573 (46%), Positives = 348/573 (60%), Gaps = 36/573 (6%)

Query: 7   LLRIENLRVSFSLMGGTIDAVRDTSLRILPGKVTALVGESGSGKSVIGQTIMGIHPKTAR 66
           LL I++LRV+F        AVR   L + PG+  ALVGESG GKS    +IM +     +
Sbjct: 4   LLEIQDLRVTFP----GHQAVRGLDLALNPGETLALVGESGCGKSATALSIMRLVGAPGQ 59

Query: 67  VNGRVLFTDPENAAAGPIDLLQLPKDGREIRSIRGNRIGLIFQEPMTSFSPLHTIGNQID 126
           V GR+LF           DLL LP     +R +RGN I +IFQEPMTS +P+ TIG QI 
Sbjct: 60  VAGRILFNGQ--------DLLALPNTA--MRQLRGNAISMIFQEPMTSLNPVLTIGQQIV 109

Query: 127 EALRIHSILSPAERAEKMYETLDLVGFSKPKKVVNMYPFELSGGMRQRAMIAMALICRPA 186
           E LR H  L+PA+   +  E LDLV   +P + ++ YP +LSGG RQR MIAMA+ C+P 
Sbjct: 110 ETLRTHQPLTPAQARARAIELLDLVKIPEPPRRIDDYPHQLSGGQRQRVMIAMAVACQPT 169

Query: 187 LLIADEPTTALDVTIQAQILKLLRDLQSRLNMSMLLITHDLGVVANIADEVAVIYQGEIM 246
           LLIADEPTTALDVTIQAQIL LL  L+  L+MS+LLITHDLGVV   AD VAV+  G  +
Sbjct: 170 LLIADEPTTALDVTIQAQILALLDQLRRELSMSLLLITHDLGVVEQWADRVAVMVGGRKV 229

Query: 247 EAGTVDDIFKAPGHPYLKGLMAAVPHFDMKPGERLKALREIKVDHESLVGKKTAAV---- 302
           E  + + +F+ P HPY +GL+A   H       R + L EI+       G+ T       
Sbjct: 230 EEASTEVLFQQPQHPYTRGLLATSLHLAGDLHYRRQRLPEIRHPDNGDAGQVTVVTPPLR 289

Query: 303 -----NKTPGPLLTVDNISKTFTTRKSSWFRKSDANATKAVNSVSFEICRGECLGLVGES 357
                + T  PLL++  +   + T +             AV  +S +I  GE LGLVGES
Sbjct: 290 SVPPPDTTRAPLLSLHRVHTRYATPQ---------GVVTAVKDISLDIYPGETLGLVGES 340

Query: 358 GSGKTTVSKILMRAVRPDEGSITFHRPEGDIDVLNAKDGDLKELRSKIQMVFQDPISSLS 417
           G GK+T+SK ++R +    G + F     DI  LN +   L+ LR ++QM+FQDP +SL+
Sbjct: 341 GCGKSTLSKTILRLLPVAAGRMLFDGQ--DITPLNER--QLQPLRRRVQMIFQDPYASLN 396

Query: 418 PRMTVGNILSEPLEIHGRGDAKYRAEKVRGLVRAIGLGESALNRYPHSFSGGQRQRIGIA 477
           PR  V  IL  PL +HG      R   +   +  + L +S+L RYPH FSGGQRQRIGIA
Sbjct: 397 PRHDVQRILERPLIVHGVTRRAQRQRLISQALERVRLPQSSLQRYPHEFSGGQRQRIGIA 456

Query: 478 RALALGPELLICDEPVSALDVSVQAQILNLLKDLQQDLGLTYLFISHNLAVVDYMADRVA 537
           RAL + P L+ICDEPVSALDVS+QAQILNLL +L+ ++GL+ LFISH+L+VV Y+ADRV 
Sbjct: 457 RALVVNPSLVICDEPVSALDVSIQAQILNLLVELKSEMGLSLLFISHDLSVVRYIADRVM 516

Query: 538 VMCEGRIVELAPREILMRSPIHPYTKSLLAAVP 570
           VM  G  VE    + + R P HPYT+ LL +VP
Sbjct: 517 VMQHGECVESGDCQQIWRQPQHPYTRLLLDSVP 549



 Score =  184 bits (467), Expect = 9e-51
 Identities = 105/267 (39%), Positives = 157/267 (58%), Gaps = 16/267 (5%)

Query: 5   ADLLRIENLRVSFSLMGGTIDAVRDTSLRILPGKVTALVGESGSGKSVIGQTIMGIHPKT 64
           A LL +  +   ++   G + AV+D SL I PG+   LVGESG GKS + +TI+ + P  
Sbjct: 299 APLLSLHRVHTRYATPQGVVTAVKDISLDIYPGETLGLVGESGCGKSTLSKTILRLLPVA 358

Query: 65  ARVNGRVLFTDPENAAAGPIDLLQLPKDGREIRSIRGNRIGLIFQEPMTSFSPLHTIGNQ 124
           A   GR+LF   +            P + R+++ +R  R+ +IFQ+P  S +P H +   
Sbjct: 359 A---GRMLFDGQDIT----------PLNERQLQPLR-RRVQMIFQDPYASLNPRHDVQRI 404

Query: 125 IDEALRIHSILSPAERAEKMYETLDLVGFSKPKKVVNMYPFELSGGMRQRAMIAMALICR 184
           ++  L +H +   A+R   + + L+ V    P+  +  YP E SGG RQR  IA AL+  
Sbjct: 405 LERPLIVHGVTRRAQRQRLISQALERVRL--PQSSLQRYPHEFSGGQRQRIGIARALVVN 462

Query: 185 PALLIADEPTTALDVTIQAQILKLLRDLQSRLNMSMLLITHDLGVVANIADEVAVIYQGE 244
           P+L+I DEP +ALDV+IQAQIL LL +L+S + +S+L I+HDL VV  IAD V V+  GE
Sbjct: 463 PSLVICDEPVSALDVSIQAQILNLLVELKSEMGLSLLFISHDLSVVRYIADRVMVMQHGE 522

Query: 245 IMEAGTVDDIFKAPGHPYLKGLMAAVP 271
            +E+G    I++ P HPY + L+ +VP
Sbjct: 523 CVESGDCQQIWRQPQHPYTRLLLDSVP 549