Pairwise Alignments

Query, 393 a.a., acyl-CoA dehydrogenase from Agrobacterium fabrum C58

Subject, 397 a.a., acyl-CoA dehydrogenase from Pseudomonas simiae WCS417

 Score = 49.7 bits (117), Expect = 1e-10
 Identities = 82/371 (22%), Positives = 137/371 (36%), Gaps = 23/371 (6%)

Query: 3   VTVAPQDETLSARAGRVATIAAKHADDVDVTGRFPQEAVDALRRERLLGIQVPSSLGGEG 62
           V V   DE     A  +A    + +   D   R P   ++   R  L GI VP + GG G
Sbjct: 7   VAVITSDEQALIVASDLAEDLRRDSAQRDRERRLPLPELEVFSRSGLWGISVPKAFGGAG 66

Query: 63  ASIQEIADICARLGQACSATAMIFAMHHIKLSSLVEHGVDSTWHPGFMRRVAGEQLLLGS 122
            S   +A + A + QA ++   I   H   L  L  +G  +     +   +AG++   G+
Sbjct: 67  VSNVTLAKVIALIAQADASLGQIPQNHFYALEVLRVNGSPAQQKRLYAEVLAGQR--FGN 124

Query: 123 ATTEGGIGGNLRNSICAIEVEGDSCRLEKD---ATVISYGSNADAILITSRAHKDAAPAD 179
           A  E G      + +  I  +GD  R+      AT   Y       ++  +         
Sbjct: 125 ALAELGT-KTAHDRVTKITRDGDGFRISGRKFYATGAIYAQRIPTSVVDEQ-------GV 176

Query: 180 QVMTVFLKNQYTLEKTHVWDTLGMRGTCSDGFLFRGEAPAAQ-IFPKPFAEIAAQSMLAS 238
           Q +    ++   L     W   G R T S   +F     AAQ + P   A     ++   
Sbjct: 177 QQLAFVPRDSEGLSVIDDWSGFGQRTTGSGSVVFDNVWVAAQDVIPFQSAFERPTTVGPL 236

Query: 239 SHLLWSAVWYGIASDAVLRAQSFVRAAAR------KSPGTAPPGAIR-LAEVSTKLQVVK 291
           + +L +A+  GIA  A   A  FVR   R          T  P  ++    +S +L   +
Sbjct: 237 AQILHAAIDTGIARAAFEDALHFVRTKTRPWIDSGTDKATDDPLTLKSFGHLSIRLHATE 296

Query: 292 SNIIAGIKAYEDTKSDPEKLMSMAFAVAMNNVKICSSETILEIIDHAMLVCGIMGYKNGT 351
           + +    +  +  ++D       A ++A+  V+  S+E  L        + G        
Sbjct: 297 ALLERSGEFLDRAQADSNAETVAAASIAVAEVRALSTEISLAAGSTLFELAG--SQATLA 354

Query: 352 PYSLGRHLRDA 362
            + L RH R+A
Sbjct: 355 EHGLDRHWRNA 365