Pairwise Alignments

Query, 308 a.a., transcriptional regulator, LysR family from Agrobacterium fabrum C58

Subject, 305 a.a., transcriptional activator of gcdH, LysR family from Pseudomonas putida KT2440

 Score =  227 bits (578), Expect = 3e-64
 Identities = 124/291 (42%), Positives = 173/291 (59%), Gaps = 1/291 (0%)

Query: 6   RRFLPSLSLLAAFEAASRTGSVTAAARELGLTQGAVSRQILALEEQLGVALFLRERQTIR 65
           RR +PS + L  FEAA+R  S T AA+EL LTQGAV RQI  LE  L V LF R R+ +R
Sbjct: 2   RRKIPSTAALICFEAAARNESFTKAAQELALTQGAVCRQIGGLEAFLNVELFRRSRRGVR 61

Query: 66  LTRAGEGYAREIREALRRISTASLNLRANPDGGTLNLGVLPSFGTRWLVPRLPDFIARHP 125
           LT AG  Y+R++   L  +   +L++        + L V+P+FGT+WL+PRL DF  RHP
Sbjct: 62  LTEAGLSYSRQVAAQLDAVERDTLSVMRQQGANVIELAVVPTFGTQWLLPRLKDFQQRHP 121

Query: 126 GISVNLLTRSSLFDFRTDTVDAAIHFGLPHWPGTELAFLMHEKVIPVCSPAFKELYGLSR 185
            ++VNL  R+  F F   T DAAI+FG   W GT+   LM E  +PVCSPA     G+  
Sbjct: 122 EVTVNLTNRTRPFLFADTTFDAAIYFGDADWSGTQSHQLMGENPVPVCSPALLNGQGMLE 181

Query: 186 PDDLLHVPLLHMTTRPDAWEQWFRSHDVRFD-NVHGMLFDQFTTIAEASSAGVGASLVPS 244
              +  +PLL  +TRP AW QWF S  +  + ++ G  ++ F+ +A+A+   +G +L+P 
Sbjct: 182 ARHIAQLPLLQQSTRPYAWRQWFGSVGMNVERDMTGPRYELFSMLAQAAMHDMGIALIPP 241

Query: 245 FMIEEELRSGRLVSAVAGEVESEEAYYLACMPDRATYPPLESFRRWIVYQA 295
           F+I+ EL  GRLV A    + S++AYYL     +     L +FR W+V QA
Sbjct: 242 FLIQRELEEGRLVVANRHALSSDKAYYLMIPERKVESASLRAFRDWLVSQA 292