Pairwise Alignments

Query, 300 a.a., ABC transporter, membrane spanning protein (dipeptide) from Agrobacterium fabrum C58

Subject, 290 a.a., putative Opine ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  233 bits (593), Expect = 5e-66
 Identities = 118/270 (43%), Positives = 166/270 (61%)

Query: 29  IWLNLKSNPLAVIGLTIIVLFIALSLLAPAIAPYDPATQNLGNRLAFPNAEHWFGTDELG 88
           +W  L  N L+ IG+ ++V+ + ++L AP IAPYDP  QN+  RL  P+AE W GTD  G
Sbjct: 15  LWQALFQNRLSWIGIGLLVMIVLVALFAPLIAPYDPLQQNIAYRLEPPSAEFWLGTDTYG 74

Query: 89  RDILSRILYGGRVTLGMVIAVVVLVAPIGLAIGCIAGYFGGIVDTVLMRVTDVFLAFPRL 148
           RD+LSR++YG RV+L +    V++   +G A+G IAGY GGI D ++    DV L+FP L
Sbjct: 75  RDVLSRLIYGTRVSLLVGFVAVMIAMVVGSALGVIAGYVGGITDRLITGFVDVLLSFPTL 134

Query: 149 ILALAFVAALKPGVESAILAIALTAWPPYARLARAETMTVRGSDFVAAYRLTGASAWRII 208
           +L L   A L   +E+ I+AIA+T   P+ R+ARA T+ ++  DFV A R  G    R++
Sbjct: 135 LLGLMVAAMLGASLENLIIAIAITEIAPFVRIARAPTIALKQRDFVEAGRSLGYGPGRLM 194

Query: 209 ARHIAPLCVPSLIVRITLDMSSIIITAASLGFLGMGAQPPSPEWGAMIATAKRFIFEQWW 268
             HI P  +  ++V   L M++ I T ASL F+G+G  PP+P WG+MI      I + WW
Sbjct: 195 TVHILPNMISEVLVLGALWMATAIRTEASLSFIGLGVPPPAPTWGSMIREGFENILDAWW 254

Query: 269 VATIPGIAIFLVSLAFNFLGDGLRDVLDPK 298
           +   P +AI L  LA + LGD LRD  DPK
Sbjct: 255 LTVFPSLAILLTVLALSLLGDALRDANDPK 284