Pairwise Alignments

Query, 300 a.a., ABC transporter, membrane spanning protein (dipeptide) from Agrobacterium fabrum C58

Subject, 298 a.a., D,D-dipeptide ABC transporter permease from Escherichia coli ECRC62

 Score =  256 bits (654), Expect = 4e-73
 Identities = 122/270 (45%), Positives = 177/270 (65%), Gaps = 1/270 (0%)

Query: 29  IWLNLKSNPLAVIGLTIIVLFIALSLLAPAIAPYDPATQNLGNRLAFPNAEHWFGTDELG 88
           +W+ LK +PL V G  IIVL + + + +P +A +DP   +L  RL  P+A HWFGTDE+G
Sbjct: 24  VWM-LKGSPLTVTGAVIIVLMLLMMIFSPWLATHDPNAIDLTARLLPPSAAHWFGTDEVG 82

Query: 89  RDILSRILYGGRVTLGMVIAVVVLVAPIGLAIGCIAGYFGGIVDTVLMRVTDVFLAFPRL 148
           RD+ SR+L G + ++   + VV +   IG  +GC++G  GG  D ++MR+ D+ L+ P L
Sbjct: 83  RDLFSRVLVGSQQSILAGLVVVAIAGMIGSLLGCLSGVLGGRADAIIMRIMDIMLSIPSL 142

Query: 149 ILALAFVAALKPGVESAILAIALTAWPPYARLARAETMTVRGSDFVAAYRLTGASAWRII 208
           +L +A  AAL P + +A+LAIA+   P Y RLAR + + VR   +V A +  GAS W +I
Sbjct: 143 VLTMALAAALGPSLFNAMLAIAIVRIPFYVRLARGQALVVRQYTYVQAAKTFGASRWHLI 202

Query: 209 ARHIAPLCVPSLIVRITLDMSSIIITAASLGFLGMGAQPPSPEWGAMIATAKRFIFEQWW 268
             HI    +P LIV+ +LD+ S I+ AA+LGF+G+GAQ PS EWGAM+A  + ++ +QWW
Sbjct: 203 NWHILRNSLPPLIVQASLDIGSAILMAATLGFIGLGAQQPSAEWGAMVANGRNYVLDQWW 262

Query: 269 VATIPGIAIFLVSLAFNFLGDGLRDVLDPK 298
               PG AI L ++ FN  GDG+RD+LDPK
Sbjct: 263 YCAFPGAAILLTAVGFNLFGDGIRDLLDPK 292