Pairwise Alignments

Query, 278 a.a., ABC transporter, membrane spanning protein (sugar) from Agrobacterium fabrum C58

Subject, 266 a.a., Sugar ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  122 bits (305), Expect = 1e-32
 Identities = 77/273 (28%), Positives = 131/273 (47%), Gaps = 15/273 (5%)

Query: 8   RKNLDRIGLFFVALVMISPVILFFIWMISLSLKY--EIDNGAYPPILIPERFAWSNYVKV 65
           RK++  +  FF  LV I        W++++S K   EI  G     L P+ F   NY  +
Sbjct: 4   RKSMALLLYFFFLLVPI-------YWLLNMSFKSNAEILGGL---TLWPQAFTLDNYRVI 53

Query: 66  FEENSFFLYFWNSVLVTGAATILALVIGVPAGYGIARLKAEKSAVV---IMIARMTPGLS 122
           F + S++  + NS+      T+++L++ +PA Y  +R +      +   ++  RM P   
Sbjct: 54  FTDASWYSGYINSLYYVCLNTLISLLVALPAAYAFSRYRFLGDRHLFFWLLTNRMAPPAV 113

Query: 123 FLIPLFLLFQWLNLLGTLWPQIIIHLVVTVPIVVWIMIGYFETTPKELEEAASIDGASSW 182
           FL+P F L+  + L  T     + H +  VP+ VWI+ G+    P+E++E A IDG S  
Sbjct: 114 FLLPFFQLYSSIGLFDTHIAVALAHCLFNVPLAVWILEGFMSGVPREIDETAYIDGYSFP 173

Query: 183 QVFRLVALPIAKPGIVVSFILAVIFSWNNFVFGIVLASRETRTLPVAVYNMLSFEQVSWG 242
           + F  + +P+   GI V+     +FSW   +    L S   + +   +   +S   + WG
Sbjct: 174 RFFVKIFIPLIGSGIGVTAFFCFMFSWVELLLARTLTSVNAKPIAAVMTRTVSASGIDWG 233

Query: 243 PLAAAALIVTLPVLLLTMFAQKQIVAGLTAGAV 275
            LAAA ++  LP +L+  F +  +  G   G V
Sbjct: 234 VLAAAGVLTILPGMLVIWFVRNHVAKGFALGRV 266