Pairwise Alignments

Query, 312 a.a., ABC transporter, membrane spanning protein (sugar) from Agrobacterium fabrum C58

Subject, 331 a.a., sugar ABC transporter permease from Serratia liquefaciens MT49

 Score =  170 bits (431), Expect = 4e-47
 Identities = 95/283 (33%), Positives = 162/283 (57%), Gaps = 15/283 (5%)

Query: 29  WPFVIPALVVISAVIVFPWVFTLWMSVHRWTLG--QEQSFIGFDNYIRLA---------S 77
           W  V PA+++++ V  +P + TL+ S     L    +  F+GF NY+ L          +
Sbjct: 39  WLLVAPAMLLLAVVAGWPLLRTLFYSFTDAMLDAPDDYRFVGFANYLDLTEGGHHYGVLA 98

Query: 78  DLRFWESLWHTLIYTVLSVVAPLFLGTLAALVFDAQFPLRGFLRGVFVMPMMATPVAIAL 137
           D  +W ++ +TL +++LSV   L  G L AL+ + +F  +G +R   ++P     +  A 
Sbjct: 99  DPLWWLAVGNTLRFSLLSVSLELVFGMLLALLMNQKFRGQGLVRTAILVPWAIPTIVSAK 158

Query: 138 VWTMMFHPQLGVLNYLLSLIGI--GPLEWIYNQSTVIPSLVLVETWQWTPLVMLIVLGGL 195
           +W  MFH Q GV+N LL   GI   PL W+      + ++V+ + W+ TP + L++L  L
Sbjct: 159 MWGWMFHDQYGVVNDLLLKTGIIATPLAWVAEPGLSMWAVVIADVWKTTPFMALMLLAAL 218

Query: 196 AAVPREPYESAEIDGANAWQKFRYLTMPMIAPFLMIAVIIRSIDAVKSFDIIYAMTQGGP 255
             +P + YE+A IDGANAWQ+FR +T+P+I P +++A+I R +DA++ FD+IY +T    
Sbjct: 219 QLIPGDLYEAARIDGANAWQRFRRITLPLIMPAMIVALIFRVMDALRVFDLIYVLTSNSE 278

Query: 256 GTASETINIYLYNTAFSYYDIGYGSAMAVVFFVIIVALSFVLL 298
            T S  ++ Y  +   SY ++G GSA +V+ F+++  ++   L
Sbjct: 279 ATVS--VSGYARDRMVSYQEMGSGSAASVLVFMMVAGIAACFL 319