Pairwise Alignments

Query, 312 a.a., ABC transporter, membrane spanning protein (sugar) from Agrobacterium fabrum C58

Subject, 302 a.a., sugar ABC transporter permease from Serratia liquefaciens MT49

 Score =  179 bits (454), Expect = 7e-50
 Identities = 96/291 (32%), Positives = 173/291 (59%), Gaps = 9/291 (3%)

Query: 21  PPRLAPNYWPFVIPALVVISAVIVFPWVFTLWMSVHRWTL---GQEQSFIGFDNYIRLAS 77
           P R     W  + P L+++  +  +P   TLW+S     L   G   +++G DN++   +
Sbjct: 5   PQRERRQAWVLLAPMLLMMLLLTAWPLGRTLWLSFTDAALVGDGVAPAWVGADNFLYALT 64

Query: 78  DLRFWESLWHTLIYTVLSVVAPLFLGTLAALVFDAQFPLRGFLRGVFVMPMMATPVAIAL 137
           D  F  +L  TL +T++SV     +G L AL+ + +F  R  LR + ++P     +  A 
Sbjct: 65  DPDFQAALGRTLYFTLVSVAFEGVIGVLVALLLNQKFHGRNLLRVLVILPWALPTIVNAT 124

Query: 138 VWTMMFHPQLGVLNYLLSLIGIGP--LEWIYNQSTVIPSLVLVETWQWTPLVMLIVLGGL 195
           +W + F+P  G +N LL+ +G+      W+ + ++ + +++L + W+  PL+ L+ L  L
Sbjct: 125 MWRLNFNPDYGSINALLTQLGVIDHYRSWLGDPASALNAVMLADIWKNYPLITLLTLAAL 184

Query: 196 AAVPREPYESAEIDGANAWQKFRYLTMPMIAPFLMIAVIIRSIDAVKSFDIIYAMTQGGP 255
             +P + YE+A +DGA+AW++FR +T+P I   L +A+++R+IDA K FDIIY MT+GGP
Sbjct: 185 QTIPDDLYEAARLDGASAWRRFRAITLPAILAPLAVALVLRTIDAFKVFDIIYVMTRGGP 244

Query: 256 GTASETINIYLYNTAFSYYDIGYGSAMAVVFFV---IIVALSFVLLMVRQR 303
             +++T++ ++Y  +FSY   G G+A AV+  +   +++AL ++L++ RQR
Sbjct: 245 MDSTKTLSFFVYQESFSYLRAGSGAAYAVLMTLLCGVLIAL-YMLMLFRQR 294