Pairwise Alignments

Query, 312 a.a., ABC transporter, membrane spanning protein (sugar) from Agrobacterium fabrum C58

Subject, 315 a.a., sugar ABC transporter permease from Dickeya dadantii 3937

 Score =  162 bits (409), Expect = 1e-44
 Identities = 84/281 (29%), Positives = 154/281 (54%), Gaps = 10/281 (3%)

Query: 28  YWPF--VIPALVVISAVIVFPWVFTLWMSVHR-------WTLGQEQSFIGFDNYIRLASD 78
           YWP+  ++P+  ++     +P +   WMSV +            +  F+G DN+I++ +D
Sbjct: 28  YWPYLLILPSFGLLLLFTFYPLLQGFWMSVFQRGVVVLPQVASTQPKFVGIDNFIQVFTD 87

Query: 79  LRFWESLWHTLIYTVLSVVAPLFLGTLAALVFDAQFPLRGFLRGVFVMPMMATPVAIALV 138
             F   L  T+++ V +V   L +    AL+   Q    G  R +   P M + + I ++
Sbjct: 88  PEFQHVLLRTVVFVVFAVPLNLVIALCMALLLAPQMRGFGLARTIVFFPSMISLLTIGIM 147

Query: 139 WTMMFHPQLGVLNYLLSLIGIGPLEWIYNQSTVIPSLVLVETWQWTPLVMLIVLGGLAAV 198
           W  +F    G++NY+LSL+ I P+ W+  ++    ++V+V  W      M+I+L GL A+
Sbjct: 148 WKWLFGYNSGLINYVLSLVDISPVPWLQQETMAQIAVVIVWVWASAGFNMMILLAGLTAI 207

Query: 199 PREPYESAEIDGANAWQKFRYLTMPMIAPFLMIAVIIRSIDAVKSFDIIYAMTQGGPGTA 258
           P + YE++ +DG + W+ F  +T+P++ P +++ V++ SI+A K ++++ ++T GGPG A
Sbjct: 208 PEDLYEASRMDGTSRWRTFWRITLPLLQPSVVVVVVLSSIEAFKVYELVISLTGGGPGRA 267

Query: 259 SETINIYLYNTAFSY-YDIGYGSAMAVVFFVIIVALSFVLL 298
           +  +   +Y  AF      G  +A +VV FVI+ ALS + L
Sbjct: 268 TVYLIQTIYENAFMQPATAGVAAAQSVVLFVILFALSVIQL 308