Pairwise Alignments

Query, 312 a.a., ABC transporter, membrane spanning protein (sugar) from Agrobacterium fabrum C58

Subject, 322 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

 Score =  160 bits (405), Expect = 4e-44
 Identities = 90/286 (31%), Positives = 151/286 (52%), Gaps = 21/286 (7%)

Query: 29  WPFVIPALVVISAVIVFPWVFTLWMSV--HRWTLGQEQSFIGFDNYIRLAS--------- 77
           W F+ P L++ +     P    +  SV      L  E+  +G +N+  L S         
Sbjct: 30  WVFLTPNLILFAVFAFLPIALNMAYSVTGSEHILLSERPSVGGENFSVLLSCQNYLDPNS 89

Query: 78  ---DLRFWESLWHTLIYTVLSVVAPLFLGTLAALVFDAQFPLRGFLRGVFVMPMMATPVA 134
              DL FW S+W+TL + VL V   +    + A+V +     RGF R VF  P++ +PV 
Sbjct: 90  CQRDL-FWRSVWNTLFFVVLQVGFMVGFSLITAVVLNRDIRARGFFRAVFFFPVLLSPVV 148

Query: 135 IALVWTMMFHPQLGVLNYLLSLIGIGPLEWIYNQSTVIPSLVLVETWQWTPLVMLIVLGG 194
           +AL+W  +   + GVLN  +  +G+G ++W+   +      V +  W       LI+L G
Sbjct: 149 VALIWKWILQ-RFGVLNAAMEGLGLGSVDWLLEANLAFGWSVFLSVWAHMGFYTLILLAG 207

Query: 195 LAAVPREPYESAEIDGANAWQKFRYLTMPMIAPFLMIAVIIRSIDAVKSFDIIYAMTQGG 254
           L A+PR+ YE+A++D A+ W+ FR +T+P++AP +++ +++  I  V++FD ++A T GG
Sbjct: 208 LQAIPRDVYEAAQLDKASPWRIFRRITLPLLAPTMLVVLVLSLIKGVQTFDEVFAFTGGG 267

Query: 255 PGTASETINIYLYNTAFSYYDIGYGSAMA-----VVFFVIIVALSF 295
           PG+A+  I  ++Y T F+     +G A A      V  V++ AL F
Sbjct: 268 PGSATTFIIQFIYQTGFAGTPRNFGLAAAASLLLAVVLVVLTALQF 313