Pairwise Alignments

Query, 312 a.a., ABC transporter, membrane spanning protein (sugar) from Agrobacterium fabrum C58

Subject, 286 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

 Score =  150 bits (379), Expect = 3e-41
 Identities = 78/274 (28%), Positives = 153/274 (55%), Gaps = 3/274 (1%)

Query: 29  WPFVIPALVVISAVIVFPWVFTLWMSVHRWTLGQEQSFIGFDNYIRLASDLRFWESLWHT 88
           + F+ P L++ +   V+P + +  +S     +   + F    N+ RL SD  F+ +L++T
Sbjct: 9   YAFLAPYLLIFATFWVWPIISSFMLSFQNTRINPWR-FAPSMNWGRLVSDPAFYNALYNT 67

Query: 89  LIYTVLSVVAPLFLGTLAALVFDAQF-PLRGFLRGVFVMPMMATPVAIALVWTMMFHPQL 147
           LI  V+ V   + L T+ A++ ++    +R   R  F  P++   VA A V+ +MF    
Sbjct: 68  LIILVIQVPVMIALATVMAVLLNSPLLKVRPLYRFAFFAPVVVGEVAYAAVFRLMFSADF 127

Query: 148 GVLNYLLSLIGIGPLEWIYNQSTVIPSLVLVETWQWTPLVMLIVLGGLAAVPREPYESAE 207
           G++N L++ +G+ P+ W  N +  +  +++  TW+W     +I+L GL ++P + YE+A 
Sbjct: 128 GIINKLITSVGLSPISWFDNANAAMALVIIAVTWRWAGYNAIIILAGLQSIPGDVYEAAT 187

Query: 208 IDGANAWQKFRYLTMPMIAPFLMIAVIIRSIDAVKSFDIIYAMT-QGGPGTASETINIYL 266
           +D  +  Q+F ++T+P++ P ++  V++  I  ++ F   + +T +GGPG  +ET+ ++L
Sbjct: 188 LDKVSKRQQFFHITLPLLKPIILFCVVLSVIGTMQLFAEPFLITNRGGPGGGTETLGLFL 247

Query: 267 YNTAFSYYDIGYGSAMAVVFFVIIVALSFVLLMV 300
           Y   F+  + GY SA+A     + +A+S + L V
Sbjct: 248 YRQGFTSLNFGYASAIAYTMAALAIAISLLNLWV 281