Pairwise Alignments

Query, 443 a.a., ABC transporter, substrate binding protein (sugar) from Agrobacterium fabrum C58

Subject, 440 a.a., ABC transporter for D-Mannitol and D-Sorbitol, periplasmic substrate-binding protein (from data) from Pseudomonas simiae WCS417

 Score = 95.9 bits (237), Expect = 2e-24
 Identities = 105/405 (25%), Positives = 168/405 (41%), Gaps = 34/405 (8%)

Query: 9   TRRAFLAGTAAIGGSAMLGIRPASAAVNWKKHAGTTLEVNLVKSPRSETLIKYLGEFE-E 67
           T +A LA T  +    +       +AV++     T   VN     R + L K    FE E
Sbjct: 4   TAKALLASTCMMTCMTL-------SAVSFGAQTLTIATVNNSDMIRMQKLSK---TFEAE 53

Query: 68  LTGIKVNAEATPEQQQRQKVVIELSSGKPSFDVVHLSYHVQKRQFEKGKWLADISGFLKD 127
              IK+N     E   RQ++  ++++    FDV+ +        +E   W A   G+L +
Sbjct: 54  HPEIKLNWVVLEENVLRQRLTTDIATQGGQFDVLTIG------MYEAALWGA--KGWL-E 104

Query: 128 PSLTDPSLVEKDFAEAGMLFAKDSDGVLRSLPFSVDYWIVYWNKELFEAKGLKYPE--TF 185
           P    P+  + D     +       G L +LPF  +  I Y+  +LF+  GL  PE  T+
Sbjct: 105 PMKDLPASYDLDDVFPSVRDGLSVKGSLYALPFYAESSITYYRTDLFKDAGLTMPEHPTW 164

Query: 186 EELVTAAEKITDPATNTYGFVARGLKN--ANTPVWTSLMLGYGAKPISADGKIDTESKEA 243
            ++   A K+TD     YG   RG      N  + T+L  GYGA+      + +    E 
Sbjct: 165 TQIGEFASKLTDKTKEQYGLCLRGKAGWGENMALITTLANGYGARWFDEKWQPEFNGPEW 224

Query: 244 VEAAKLYQRLMTKAAPPGVSGFNWAEAQSAFLQGKIGMWFDGVGFAPPIENPEKSRVVGK 303
            +A   Y   M K+ PPG S   + E  + F  GK  +W D       + +  +S+V   
Sbjct: 225 KDALNFYVDNMKKSGPPGASSNGFNENLALFNSGKCAIWVDASVAGSFVTDKTQSKVADH 284

Query: 304 VGYGVMPKGPAVQAAG-TFGDGLGVVEASSKKEAAYLFCQWAISHDMGARLLQAG--AGV 360
           VG+   P     +     +   L +  +S  K+AA +F  WA S + G  + +    A V
Sbjct: 285 VGFTFAPHEKTDKGTSWLYSWSLAIPTSSKAKDAAKVFTSWATSKEYGELVAKTDGIANV 344

Query: 361 P--FRQSILEDQKVREGVKMPAAWLDAVVGSGKVSQLALPVIIPV 403
           P   R+S   D+ ++      A +    + S KV+    P + PV
Sbjct: 345 PPGTRKSTYNDEYMK-----AAPFAKVTLESLKVADPTKPTLKPV 384