Pairwise Alignments

Query, 271 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 406 a.a., lytic murein transglycosylase from Agrobacterium fabrum C58

 Score =  115 bits (287), Expect = 2e-30
 Identities = 80/246 (32%), Positives = 124/246 (50%), Gaps = 17/246 (6%)

Query: 7   ILAGVAMVSVLAATPVMAAQCGNTSAGFDAWVSAFKQEAAGRGVSASVLDRAFSGVSY-N 65
           + AG+A    ++ +PV A        GF  W++ F   AA  G+S +   +AF+GVS  +
Sbjct: 15  MFAGLA----ISLSPVSA----RADQGFKQWINQFYATAAKEGISKATYQKAFAGVSEPD 66

Query: 66  QATIRADRGQHSFKLSFEQFMQKRGGQTIISRGKTMKKNNAALFASIERTYGVPAGPLLA 125
              +R    Q  F      ++  R     +  G+ MK  +A     IER + V    +LA
Sbjct: 67  PDALRKATFQPEFTTQIWDYVDSRVNPYTVRIGREMKMKHATTLNWIERNFNVDKHIILA 126

Query: 126 IWGMETGFGGFMGNQHTL----SAVATLSF-DCRRSDYFTEQLYAALKLVGSGSLNVNA- 179
           IW ME+ +G  +     L     A+ATL++ D +R+ +   QL AALK++ SG +     
Sbjct: 127 IWSMESNYGAVLEKPERLHNIPQALATLAYSDPKRAKFARTQLIAALKILQSGDVTPKQL 186

Query: 180 KGAAHGEIGQTQFLPLNVVRYGVDFDRDGRIDLVGSRADALASTANFLVGHGWQRGA--G 237
            G+  G +G TQF+P + + Y VD D +G+ D+  S  DALA+ AN L  +GW+ G   G
Sbjct: 187 TGSWAGAMGHTQFIPTSYLLYAVDADGNGKRDIWHSVPDALATAANLLAKNGWEPGRTWG 246

Query: 238 YQQGQP 243
           Y+   P
Sbjct: 247 YETAVP 252