Pairwise Alignments

Query, 281 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 292 a.a., endonuclease from Pseudomonas simiae WCS417

 Score = 55.1 bits (131), Expect = 2e-12
 Identities = 71/228 (31%), Positives = 100/228 (43%), Gaps = 34/228 (14%)

Query: 73  IQEIGA-----DIIALQEADSRFGERTGLLDLARLERESGLVPVPVQAGVKAHG---WHG 124
           +Q+IG      D++ALQEAD     R+G ++      + G  P   Q   +  G    H 
Sbjct: 70  LQKIGKLLNDFDLVALQEADGG-SMRSGYINQVEHLAQLGAFPYWYQQLNRNLGRLAQHS 128

Query: 125 NVVLFR--EGAVRDVHTLKLPGLEPRGALVVELDLKSGGTLRVIAAHFGLLRHSRAQQAK 182
           N VL R    A+ D     LPG + RGA++V    +    L V+  H  L   +R  Q  
Sbjct: 129 NGVLSRLKPSAIEDH---PLPGPKGRGAILVRFG-EGPEALVVVMMHLALGARTRTMQLA 184

Query: 183 ALVGLLEARNECATILMGDLNEWRLGNGSSL---NTFRDAFGTLPPAVPSFPSNLPVLAL 239
            +  L+   N    +LMGD+N     + S L   +  RD     P A  +FPS  P   L
Sbjct: 185 YIRELIG--NYKHQVLMGDMNT----HASDLLQNSPLRDLGLLAPQAEATFPSWRPQRCL 238

Query: 240 DRIIANREGLIEQVEAHDSALARIASDHLPLKAAIR------TDLLPA 281
           D I+ +    +E V+     LA+  SDHLP+   IR       D LPA
Sbjct: 239 DHILLSPTLTLESVQ----VLAQPISDHLPVAVEIRLPGSLTADALPA 282