Pairwise Alignments

Query, 281 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 260 a.a., hypothetical protein from Pseudomonas sp. DMC3

 Score = 57.8 bits (138), Expect = 2e-13
 Identities = 68/262 (25%), Positives = 107/262 (40%), Gaps = 30/262 (11%)

Query: 34  RQNAAPATKDHSFPVIASYNVHK-CVGRDRKFDPDRTSRVIQEIGADIIALQEA------ 86
           ++ A  A   H   V+ + N HK     +R+F        ++   AD++ LQE       
Sbjct: 6   KRQAVDAPVIHRLRVL-TVNTHKGFTALNRRFVLPELREAMRSTSADLVFLQEVVGEHER 64

Query: 87  -DSRFGERTGLLDLARLERESGLVPVPVQAGVKAHGWHGNVVLFREGAVRDVHTL--KLP 143
             SR+ +         L           +  V   G HGN +L +   +R+   L   + 
Sbjct: 65  HSSRYNDWPQTSQYEFLADSMWSDFAYGRNAVYPDGHHGNALLSKY-PIREYRNLDVSIT 123

Query: 144 GLEPRGALVVELDLKSGGTLRVIAAHFGLLRHSRAQQAKALVGLLEA-RNECATILMGDL 202
           G E RG L   LD+     +  I  H  LL   R  Q + L  LLE+  ++   I+ GD 
Sbjct: 124 GPERRGLLHCILDVPGHAEVHAICVHLSLLESHRQLQLQLLCQLLESLPDDAPVIIAGDF 183

Query: 203 NEWRLGNGSSL---NTFRDAFGTL--PPAVPSFPSNLPVLALDRIIANREGLIEQVEAHD 257
           N+W+L   ++L   +   +AF      PA  ++P+  P+L LDRI       +    +HD
Sbjct: 184 NDWQLQGNAALARRDYLHEAFERHHGRPA-KTYPARFPLLRLDRI------YLRNASSHD 236

Query: 258 SALA-----RIASDHLPLKAAI 274
             +         SDHLPL   +
Sbjct: 237 PRILGNKPWTHLSDHLPLAVEV 258