Pairwise Alignments

Query, 281 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 253 a.a., endo/exonuclease/phosphatase family protein from Escherichia coli BL21

 Score = 49.7 bits (117), Expect = 6e-11
 Identities = 69/252 (27%), Positives = 98/252 (38%), Gaps = 23/252 (9%)

Query: 41  TKDHSFPVIASYNVHK-CVGRDRKFDPDRTSRVIQEIGADIIALQEADSRFGERT----G 95
           T+  SF V+ + N+HK     +R+F        ++ + ADI+ LQE              
Sbjct: 5   TQQFSFKVL-TINIHKGFTAFNRRFILPELRDAVRTVSADIVCLQEVMGAHEVHPLHVEN 63

Query: 96  LLDLARLERESGLVPVPVQAGVKA---HGWHGNVVLFREGAVR-DVHTLKLPGLEPRGAL 151
             D +  E  +  +      G  A    G HGN VL R      +   + + G E RG L
Sbjct: 64  WPDTSHYEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIEHYENRDVSVDGAEKRGVL 123

Query: 152 VVEL-DLKSGGTLRVIAAHFGLLR-HSRAQQAKALVGLLEARNECATILMGDLNEWRLGN 209
              +    +G  + V+  H GL   H +AQ A     + E  +    ++ GD N+WR   
Sbjct: 124 YCRIVPPMTGKAIHVMCVHLGLREAHRQAQLAMLAEWVNELPDGEPVLVAGDFNDWRQKA 183

Query: 210 GSSLNT-------FRDAFGTLPPAVPSFPSNLPVLALDRIIANREGLIEQVEAHDSALAR 262
              L         F  A G   PA  +FP   P+L LDRI   +        A      R
Sbjct: 184 NHPLKVQAGLDEIFTRAHGR--PA-RTFPVQFPLLRLDRIYV-KNASASAPTALPLQTWR 239

Query: 263 IASDHLPLKAAI 274
             SDH PL A I
Sbjct: 240 HLSDHAPLSAEI 251