Pairwise Alignments

Query, 299 a.a., transcriptional regulator, LysR family from Agrobacterium fabrum C58

Subject, 304 a.a., Probable transcription regulator protein of MDR efflux pump cluster from Variovorax sp. SCN45

 Score =  318 bits (816), Expect = 7e-92
 Identities = 152/294 (51%), Positives = 207/294 (70%)

Query: 1   MDQLSAMRVFTRVVETGNFSRAATALNMPKTTVTNMVQALEAHLQTTLLNRTTRRVMLTT 60
           MDQ+ AMR+F RVVE G F+RAA +L +PK TVT  +QALE+ L+  LLNRTTRRV +T 
Sbjct: 1   MDQIQAMRIFVRVVEAGTFTRAADSLALPKGTVTKQIQALESRLRVKLLNRTTRRVTVTP 60

Query: 61  DGALYYERASQILSEIEELDGSMSSAQVQPSGRLRVEMAGVFADLVVIPHLCEFYQRYPQ 120
           DGA Y+ERA+++L++ ++++ SM++AQ  P+GRLR+++    A LV++P L  F  RYP 
Sbjct: 61  DGAAYFERAARLLNDFDDMEASMTNAQANPTGRLRIDIGTSVARLVILPALATFCDRYPD 120

Query: 121 IRLDLGVGDRLVDYIAENVDCALRVGVLRDQSLIARKVGELRFETFASPSYIENFGMPRE 180
           I++DLGV DR VD I++NVDC +R G L DQSL+AR++G L F T ASP+YI+ +GMP+ 
Sbjct: 121 IQVDLGVSDRTVDLISDNVDCVIRAGELSDQSLVARRIGTLHFVTVASPAYIKRYGMPQH 180

Query: 181 PEDLEKEHYSVGYLNATTGQIMPASFDNGVRSVELTPNYVVSVNDSRTYLNAALAGMGIV 240
           P D+EK H+ V Y + TT ++ P  F  G   +EL   Y VSVN+S  ++ A L G GI 
Sbjct: 181 PNDIEKRHHVVSYFSGTTRRVYPHEFKKGDEQIELNGPYRVSVNESNAHIAAVLGGFGIS 240

Query: 241 QLPVFMVRDALSRGELVPVLSEWRREAMPIYVVYPQTRHVTNKVRVFVDWLAKL 294
           Q   FM    L  GELV VL +W R+ +PI+VVYP  RH++ KVR FVDW A+L
Sbjct: 241 QCITFMAEPLLESGELVEVLPDWSRDPLPIHVVYPPNRHLSAKVRAFVDWAAEL 294