Pairwise Alignments

Query, 302 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 302 a.a., Permease of the drug/metabolite transporter (DMT) superfamily from Variovorax sp. SCN45

 Score =  130 bits (327), Expect = 4e-35
 Identities = 84/290 (28%), Positives = 144/290 (49%), Gaps = 11/290 (3%)

Query: 16  LIIATLCWGGNTVAGKLAVGHISPMAFTFLRWVLAVAIIFAISVPQLIKDWPVVKQRLPY 75
           L++  L W GN V G+L    +SP+   F+RWV+A  I+  ++ P L +  P+      Y
Sbjct: 16  LVVPPLLWAGNAVVGRLVRELVSPLTLNFVRWVIAFLIVLPLAAPVLRRGSPLWPHWRRY 75

Query: 76  FFVLGSVGYTAFNVFLYTALQHTSAINAAVIQAGIPMVIFVLNFVLFRTRVLFGQIAGFC 135
             +LG +G   +N F Y ALQ ++ IN  ++ + +P+ +     + F  R+   ++ G  
Sbjct: 76  A-LLGLLGIGLYNAFQYLALQTSTPINVTLVGSSVPLWMLATGALFFGARISAREVGGAL 134

Query: 136 LTISGVALLASHGDPLSLLQLEMNVGDAVMLLAVLVYAIYTVIL--RWKP---AVDWRTL 190
           L+++GV L+ S G+   L+ L +  GD  M+L  + +A Y+ +L    +P     DW   
Sbjct: 135 LSMAGVLLVLSRGEWRQLMALRLVPGDLYMILGSIAWAFYSWMLARTHEPKDVRQDWSAF 194

Query: 191 MAIPAFFALLTSVPLVFFEMSRESLIWPDQKGWML---VVYAGIFASLIAQILYIKGVEQ 247
           +     F +  S  L   E +          GW L   +++ GI  +++A   +  GV++
Sbjct: 195 LMAQLVFGIGWSGALAAGEWTLTDA--HIDLGWPLLAAMLFIGIGPAVLAYRCWGTGVQR 252

Query: 248 IGANRAGLFINLVPVFGTLLSVFVLSETLHTYQIAALFMALAGIAVAERK 297
            G   A +F+NL P+F  +LS   L E  H Y  AA  + + GI V+ R+
Sbjct: 253 AGPQAASIFMNLTPLFAAVLSAAFLRELPHWYHGAAFVLIVGGIVVSSRR 302