Pairwise Alignments

Query, 340 a.a., ribosomal large subunit pseudouridine synthase, RluD subfamily from Agrobacterium fabrum C58

Subject, 344 a.a., RNA pseudouridine synthase from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  231 bits (589), Expect = 2e-65
 Identities = 132/317 (41%), Positives = 186/317 (58%), Gaps = 19/317 (5%)

Query: 24  RIDVWLVGEVGSDLSRSRLKALIEQGAVLLNGQPVTEPKKKVHPGDRVEIVMPE-PEDPV 82
           R+D +L+  +  +++R++L+  I   AV +N +PV +   KV P D + + + E P D  
Sbjct: 32  RLDKFLMDRL-PNVTRNKLQGAIRSEAVQVNQKPV-KVSYKVKPLDVITVTLAEAPRDTD 89

Query: 83  PQGEDIPLDVEYEDEDLIVLVKPAGLVVHPGAGNWTGTLVNALIYHCGDSLSGIGGVKRP 142
              E+IPLD+ YED++L+++ K AG+VVHP   NW GTLVNAL YH  +  +   G  RP
Sbjct: 90  IVPENIPLDIIYEDDELLLVNKAAGMVVHPAYNNWNGTLVNALTYHLQNLPTHRNGEGRP 149

Query: 143 GIVHRLDKETSGVMVVAKNDNAHRHLAAQFADHGRTGPLERAYKAVVWGRPRTLRGTVDA 202
           G+VHR+DK+TSG++V+AK D +  +LA QF DH     +ER Y A+VWG P+  +GT+  
Sbjct: 150 GLVHRIDKDTSGLLVIAKTDYSMAYLAKQFFDHS----IERTYYALVWGVPKEQKGTITG 205

Query: 203 ALGRGT-DRTKRAVKNEDSFDAREAITHYEVMERFHEKPDASCLASMVECRLETGRTHQI 261
            +GR   DR   AV     +  + A+THY+V+  F          S+V+C LETGRTHQI
Sbjct: 206 HVGRSAKDRKVMAVYPAGDY-GKHAVTHYKVLRSFR-------YVSLVQCNLETGRTHQI 257

Query: 262 RVHMAHIGHPLIGDPEYGA---AFRTKANLLDEPARSTVNRFPRQALHAYLLAFEHPRTG 318
           R HM HIGHPL  D  YG     +            +     PRQALHA  L F HP T 
Sbjct: 258 RAHMKHIGHPLFSDATYGGDKILYGMPNGTYKSFVENAFKLMPRQALHAKSLGFLHPDTK 317

Query: 319 EVMEFETDMPEDMEELV 335
           E M+F +D+PED   ++
Sbjct: 318 EFMQFNSDLPEDFRAVL 334