Pairwise Alignments

Query, 232 a.a., RNA methylase from Agrobacterium fabrum C58

Subject, 248 a.a., 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB from Pseudomonas putida KT2440

 Score = 58.5 bits (140), Expect = 1e-13
 Identities = 49/191 (25%), Positives = 89/191 (46%), Gaps = 5/191 (2%)

Query: 38  VPVYVAEAPVLDGIVGFHLHRGILALGRRVRDDG---LEQMTAALPASSLVLVGCGISNH 94
           VPV  AE   +D  V   +H+G++A     +  G   LE++        L+LV  G+++ 
Sbjct: 50  VPVGQAERREMDAWVE-GVHQGVVAEVSPSQVWGELMLEELLERTETPPLILVLDGVTDP 108

Query: 95  DNLGAMFRNAAAFYADAVLLDETCCDPLYRKALRVSVGSVLSVPYHRGGGAVEMLERLSE 154
            NLGA  R A A  A AV++ +     L     +V+ G+   +P          LE+L +
Sbjct: 109 HNLGACLRTADAAGATAVIVPKDKSATLTPVVRKVACGAAEVIPLVAVTNLARTLEKLQQ 168

Query: 155 EGFAIWGLSPDGKTEIRDIPRSERMALVIGTEGEGLPQSVLSRFQ-TARIAQSPQVDSLN 213
            G  + G + + + EI     +  + +++G EG+G+ +          ++  +  V SLN
Sbjct: 169 RGLWVVGTAGEAEQEIYQQDLTGPLVMIMGAEGKGMRRLTREHCDFLVKLPMAGSVSSLN 228

Query: 214 AGTASGLALYQ 224
              A+G+ L++
Sbjct: 229 VSVATGVCLFE 239