Pairwise Alignments

Query, 300 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

Subject, 307 a.a., L-valine ABC transporter membrane protein / L-isoleucine ABC transporter membrane protein / L-leucine ABC transporter membrane protein from Pseudomonas syringae pv. syringae B728a ΔmexB

 Score =  300 bits (767), Expect = 4e-86
 Identities = 157/304 (51%), Positives = 218/304 (71%), Gaps = 8/304 (2%)

Query: 3   YFIQQLINGLTLGSIYGLIAIGYTMVYGIIGMINFAHGDIFMLGGFAALIVFLIATSFFA 62
           +++QQL+NGLT+GS Y LIAIGYTMVYGIIGMINFAHG+++M+G + A +   +A     
Sbjct: 6   HYMQQLVNGLTIGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVAFMA--LAGLAML 63

Query: 63  GI-PVALLLLLMMIVAMLMTGLWNWVIERVAYRPLRGSFRLAPLITAIGMSIALSNFIQV 121
           GI  + LL++     A+++T  + + IERVAYRPLR S RL PLI+AIGMSI L N +Q+
Sbjct: 64  GIHSLPLLMIAGFAAAIIVTSAYGYSIERVAYRPLRNSNRLIPLISAIGMSIFLQNSVQL 123

Query: 122 TQGPRNKPIPSMVTESYHFGA-----ITVSLKQLIIMVVTSVLLFAFWYIVNKTPLGRAQ 176
           +QG  N  IP+++  S  FG      + +S  Q+++ VVT + +      ++++ +GRA 
Sbjct: 124 SQGSGNFAIPNLLPGSLSFGPGGAEEVLISYMQIVVFVVTLLAMTGLTLFISRSRMGRAC 183

Query: 177 RATEQDRKMAALLGVDVDKTISITFIMGAALAAVAGTMYLMYYGVASFSDGFVPGVKAFT 236
           RA  +D KMA LLG++ +  I++TF++GAALAAVA  +  M YGV + + GF+ G+KAFT
Sbjct: 184 RACAEDMKMANLLGINTNNIIALTFVVGAALAAVAAMLLSMQYGVINPNAGFLVGLKAFT 243

Query: 237 AAVLGGIGSLPGAVLGGLLIGLIESLWSAYFSIAYKDVAAFGILAFVLIFKPTGILGRPE 296
           AAVLGGIGS+PGAVLGGL++G+ E+  +  F   YKDV AFG+L  VL+F+PTGILGRPE
Sbjct: 244 AAVLGGIGSIPGAVLGGLVLGVAEAFGADIFGDQYKDVVAFGLLVLVLLFRPTGILGRPE 303

Query: 297 VEKV 300
           VEKV
Sbjct: 304 VEKV 307