Pairwise Alignments

Query, 300 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

Subject, 309 a.a., High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  283 bits (723), Expect = 5e-81
 Identities = 149/302 (49%), Positives = 202/302 (66%), Gaps = 9/302 (2%)

Query: 1   MEYFIQQLINGLTLGSIYGLIAIGYTMVYGIIGMINFAHGDIFMLGGFAALIVFLIATSF 60
           ME  +QQ+INGL LGS+Y L+A+GYTMVYGIIG+INFAHGD+ M+G   +  V     + 
Sbjct: 1   MEVLLQQIINGLVLGSMYALVALGYTMVYGIIGLINFAHGDVLMVGALTSWTVIGWMMNA 60

Query: 61  FAGIPVALLLLLMMIVAMLMTGLWNWVIERVAYRPLRGSFRLAPLITAIGMSIALSNFIQ 120
             G+P  L+L L  I+AM++    N+ IE++AYRPLR S RLAPLITAIGMS+ L  F  
Sbjct: 61  STGLPTWLILFLATIIAMVVCATLNFTIEKLAYRPLRNSNRLAPLITAIGMSLLLQTFAM 120

Query: 121 VTQGPRNKPIPSMVT-ESYHFGAITVSLKQLIIMVVTSVLLFAFWYIVNKTPLGRAQRAT 179
           +   P  K  PSM++ E    G   VS+ Q++I+  T+V L    ++VN+T LGRA RAT
Sbjct: 121 IIWAPNPKSYPSMLSREPIAIGGAVVSVTQVVILATTAVTLAFLMWLVNRTNLGRAMRAT 180

Query: 180 EQDRKMAALLGVDVDKTISITFIMGAALAAVAGTMYLMYYGVASFSDGFVPGVKAFTAAV 239
            ++ ++AAL+G+  D  IS TFI+GA LAA+AG M+   YG    + GF+PG+KAF AAV
Sbjct: 181 AENPRVAALMGIKPDVVISATFIIGAMLAAIAGVMWASNYGTVQHAMGFMPGLKAFVAAV 240

Query: 240 LGGIGSLPGAVLGGLLIGLIESLWSAY--------FSIAYKDVAAFGILAFVLIFKPTGI 291
           +GGIG+L GAV+GG+ +GLIESL + Y            Y D+ AF +LA VL  +P+G+
Sbjct: 241 MGGIGNLAGAVVGGIALGLIESLGAGYLGKLTGGVLGSQYTDIFAFIVLAIVLTLRPSGL 300

Query: 292 LG 293
           LG
Sbjct: 301 LG 302