Pairwise Alignments

Query, 296 a.a., ABC transporter, nucleotide binding/ATPase protein from Agrobacterium fabrum C58

Subject, 263 a.a., Lipopolysaccharide export system ATP-binding protein LptB from Xanthobacter sp. DMC5

 Score =  191 bits (484), Expect = 2e-53
 Identities = 106/267 (39%), Positives = 168/267 (62%), Gaps = 10/267 (3%)

Query: 13  TGNTTGDTILKVEHLSMKFGGLMAINDFSFEAKRGEITALIGPNGAGKTTVFNCITGFYK 72
           T  +TGD +L+VE L+ +F G+ A++D SF  K GEI A+IGPNGAGK+T+FN I G  +
Sbjct: 3   TPRSTGD-LLEVEGLTCRFAGVTAVDDLSFRVKAGEIKAVIGPNGAGKSTLFNMIAGVTR 61

Query: 73  PTMGMITMRQQNGEAHLLERLPDFEITKKAKVARTFQNIRLFSGLTVLENLLVAQHNALM 132
           PT G I       +   ++RLP     ++  +ARTFQN+++F  ++VLEN++V +H   +
Sbjct: 62  PTDGAIKF-----DGARVDRLPTHARARRG-IARTFQNLQIFREMSVLENVMVGRH---L 112

Query: 133 KASGYTILGLLGLPAYKRAVASSIEKAKYWLEKADLVDRADDPAGDLPYGAQRRLEIARA 192
           +    T+  LL +P+      +    A   LE+  L  +A  PAG L +G  + LE+ARA
Sbjct: 113 RGRATTLSALLHIPSVGAEERAMEATAMALLERFGLAAKAGLPAGSLAFGQMKVLELARA 172

Query: 193 MCTGPELLCLDEPAAGLNPKESLALNTLLRSIRDEGTSLLLIEHDMSVVMQISDHVVVLE 252
           + + P LL LDEPAAGL   E+  +   +R +  +G ++LL+EH+M +VM +S  ++VL 
Sbjct: 173 LASEPRLLLLDEPAAGLPHAEADKMAETIRDLNRDGMTVLLVEHNMRMVMSLSHDILVLN 232

Query: 253 YGQKISDGSPDHVKNDPKVIAAYLGVE 279
            G++I++G+ + V+  P+V++AYLG E
Sbjct: 233 NGRRIAEGTAEDVRRHPEVLSAYLGEE 259