Pairwise Alignments

Query, 296 a.a., ABC transporter, nucleotide binding/ATPase protein from Agrobacterium fabrum C58

Subject, 261 a.a., Lipopolysaccharide export system ATP-binding protein LptB from Xanthobacter sp. DMC5

 Score =  208 bits (529), Expect = 1e-58
 Identities = 115/263 (43%), Positives = 168/263 (63%), Gaps = 9/263 (3%)

Query: 20  TILKVEHLSMKFGGLMAINDFSFEAKRGEITALIGPNGAGKTTVFNCITGFYKPTMGMIT 79
           ++L+VE L + FGG+ A+ND SF  + G+I ++IGPNGAGKTT+FN I+G Y P  G + 
Sbjct: 2   SLLQVEGLGISFGGVTAVNDVSFGLETGKIVSVIGPNGAGKTTLFNMISGVYLPKSGRVR 61

Query: 80  MRQQNGEAHLLERLPDFEITKKAKVARTFQNIRLFSGLTVLENLLVAQHNALMKASGYTI 139
           +   +GE  +    PD    +   ++RTFQN+++F  ++VLEN++V  H   M   G  +
Sbjct: 62  L---DGE-DVTGLRPDLLAVRG--MSRTFQNLQIFHEMSVLENVIVGFH---MHERGPVL 112

Query: 140 LGLLGLPAYKRAVASSIEKAKYWLEKADLVDRADDPAGDLPYGAQRRLEIARAMCTGPEL 199
             L GLP  +R   ++ E A+  LE+  L   A+  AG L YGA +RLEIARA+   P +
Sbjct: 113 ADLFGLPGSRRRARAAAEGARVLLERVGLERAAEREAGALSYGALKRLEIARALAARPRV 172

Query: 200 LCLDEPAAGLNPKESLALNTLLRSIRDEGTSLLLIEHDMSVVMQISDHVVVLEYGQKISD 259
           L LDEPAAG N  E+  ++ L+  +   G ++LL+EHDM +VM++SD +VVL++G+KI++
Sbjct: 173 LLLDEPAAGCNAVETEEIDRLICEVAKTGVAILLVEHDMKLVMRLSDTIVVLDHGEKIAE 232

Query: 260 GSPDHVKNDPKVIAAYLGVEDDE 282
           G P  V  DPKVI AYLG    E
Sbjct: 233 GDPALVSRDPKVIEAYLGAGTTE 255