Pairwise Alignments

Query, 296 a.a., ABC transporter, nucleotide binding/ATPase protein from Agrobacterium fabrum C58

Subject, 274 a.a., Lipopolysaccharide export system ATP-binding protein LptB from Xanthobacter sp. DMC5

 Score =  210 bits (535), Expect = 3e-59
 Identities = 116/270 (42%), Positives = 164/270 (60%), Gaps = 7/270 (2%)

Query: 16  TTGDTILKVEHLSMKFGGLMAINDFSFEAKRGEITALIGPNGAGKTTVFNCITGFYKPTM 75
           T+   IL VEH+ MKFGGL AI D  F+   GEI +LIGPNGAGKTT FN +TGF KPT 
Sbjct: 4   TSSSAILNVEHVGMKFGGLTAIADLHFDVHEGEILSLIGPNGAGKTTAFNIMTGFLKPTQ 63

Query: 76  GMITMRQQNGEAHLLERLPDFEITKKAKVARTFQNIRLFSGLTVLENLLVAQHNALMKAS 135
           G +  R ++     L +    EI +   +ARTFQ   +F+  +V +N+L+  H       
Sbjct: 64  GRVLFRGRD-----LSQTRPNEIARLG-LARTFQRTSVFADDSVRDNVLIGLHRFGDDTR 117

Query: 136 GYTILG-LLGLPAYKRAVASSIEKAKYWLEKADLVDRADDPAGDLPYGAQRRLEIARAMC 194
              +L  L   PA +RA  +  E+A+  ++   L  RA D AG L YG QR +  A A+ 
Sbjct: 118 ATALLDRLFPTPAARRAENAVRERAEAIIDMVGLSARAGDKAGSLSYGEQRLVGFALALA 177

Query: 195 TGPELLCLDEPAAGLNPKESLALNTLLRSIRDEGTSLLLIEHDMSVVMQISDHVVVLEYG 254
             P++L LDEP +G+N  E+     L+R +RDEG ++LL+EHDM +VM++SD +V L YG
Sbjct: 178 VEPKMLLLDEPVSGMNASETQGFVRLIRKVRDEGVTILLVEHDMPMVMEVSDRIVCLNYG 237

Query: 255 QKISDGSPDHVKNDPKVIAAYLGVEDDEVE 284
           + I++G P+ ++ DPKVI AYLG    ++E
Sbjct: 238 RLIAEGPPEAIRTDPKVIEAYLGKSAAKLE 267