Pairwise Alignments

Query, 296 a.a., ABC transporter, nucleotide binding/ATPase protein from Agrobacterium fabrum C58

Subject, 284 a.a., Lipopolysaccharide export system ATP-binding protein LptB from Xanthobacter sp. DMC5

 Score =  198 bits (504), Expect = 1e-55
 Identities = 116/261 (44%), Positives = 162/261 (62%), Gaps = 11/261 (4%)

Query: 22  LKVEHLSMKFGGLMAINDFSFEAKRGEITALIGPNGAGKTTVFNCITGFYKPTMGMITMR 81
           L V+ L + FGGL A+ D SFE K G ITALIGPNGAGKT++FNCI+GFY+P  G I + 
Sbjct: 18  LAVDGLGLWFGGLKALTDVSFEVKPGTITALIGPNGAGKTSLFNCISGFYRPRAGSIRLD 77

Query: 82  QQN-GEAHLLERLPDFEITKKAKVARTFQNIRLFSGLTVLENLLVAQHNALMKASGYTIL 140
             +    H  ER        KA +ARTFQNI LF G+TVL+N+ + +H A MK +    L
Sbjct: 78  GADITRTHPPER-------AKAGLARTFQNIALFKGMTVLDNIKLGRH-AHMKTNLLQAL 129

Query: 141 GLLGLPAYKRAVASSIEKAKYWLEKADLVDRADDPAGDLPYGAQRRLEIARAMCTGPELL 200
              G  A    +    E  +  ++  ++    + P   L YG Q+R+E+ARA+   P LL
Sbjct: 130 TYWG-AARAEEMELRAEVERQIIDFLEIDHIRNKPVASLSYGLQKRVELARALAMRPRLL 188

Query: 201 CLDEPAAGLNPKESLALNTLLRSIRDE-GTSLLLIEHDMSVVMQISDHVVVLEYGQKISD 259
            LDEP AG+N +E+  +   +  +++E G S+L++EHDM++VM ISDHVVVL +G+ I+ 
Sbjct: 189 MLDEPVAGMNREETEDMARFILDVKEEWGISILMVEHDMAMVMDISDHVVVLNFGKVIAQ 248

Query: 260 GSPDHVKNDPKVIAAYLGVED 280
           G P  V+ +P+V AAYLG  D
Sbjct: 249 GLPAEVQGNPEVAAAYLGSGD 269