Pairwise Alignments

Query, 296 a.a., ABC transporter, nucleotide binding/ATPase protein from Agrobacterium fabrum C58

Subject, 291 a.a., High-affinity branched-chain amino acid transport ATP-binding protein BraF from Pseudomonas putida KT2440

 Score =  268 bits (685), Expect = 1e-76
 Identities = 140/290 (48%), Positives = 201/290 (69%), Gaps = 28/290 (9%)

Query: 19  DTILKVEHLSMKFGGLMAINDFSFEAKRGEITALIGPNGAGKTTVFNCITGFYKPTMGMI 78
           D IL V++L M+FGG+ A++D S + +R +I ALIGPNGAGKTTVFNC+TGFYK + G I
Sbjct: 4   DIILSVDNLMMQFGGIKALSDVSLKVRRNQIFALIGPNGAGKTTVFNCLTGFYKASGGRI 63

Query: 79  TMRQQNGEAHLLERL------PDF------------------EITKKAKVARTFQNIRLF 114
            +  +    ++++ L       DF                   +  +A +ARTFQNIRLF
Sbjct: 64  ELNVRGSHTNVIQLLGERFQAADFVSPARFANRMYYKMFGGTHLVNRAGLARTFQNIRLF 123

Query: 115 SGLTVLENLLVAQHNALMKASGYTILGLLGLPAYKRAVASSIEKAKYWLEKADLVDRADD 174
             ++V+ENLLVAQH   M  +   + G+L   AY++A + +++ A YWLE  DLVD A+ 
Sbjct: 124 KEMSVVENLLVAQH---MWVNRNLLAGVLNTKAYRKAESDALDHAFYWLEVVDLVDCANR 180

Query: 175 PAGDLPYGAQRRLEIARAMCTGPELLCLDEPAAGLNPKESLALNTLLRSIRDE-GTSLLL 233
            AG+L YG QRRLEIARAMCT P+++CLDEPAAGLNP+E+ AL+ ++R +RDE   +++L
Sbjct: 181 LAGELSYGQQRRLEIARAMCTRPKIICLDEPAAGLNPQETEALSRMIRVLRDEHDITVVL 240

Query: 234 IEHDMSVVMQISDHVVVLEYGQKISDGSPDHVKNDPKVIAAYLGVEDDEV 283
           IEHDM +VM ISDH+VVL++G  I++G+P  ++++P VIAAYLG +++E+
Sbjct: 241 IEHDMGMVMSISDHIVVLDHGNVIAEGAPQDIRHNPTVIAAYLGADEEEL 290