Pairwise Alignments

Query, 296 a.a., ABC transporter, nucleotide binding/ATPase protein from Agrobacterium fabrum C58

Subject, 255 a.a., branched chain amino acid transporter - ATP binding subunit from Pseudomonas putida KT2440

 Score =  246 bits (629), Expect = 3e-70
 Identities = 129/258 (50%), Positives = 177/258 (68%), Gaps = 10/258 (3%)

Query: 21  ILKVEHLSMKFGGLMAINDFSFEAKRGEITALIGPNGAGKTTVFNCITGFYKPTMGMITM 80
           IL+V  LSM+FGGL+A+N  +   K  ++ ALIGPNGAGKTTVFNC+TGFYKP+ G I +
Sbjct: 5   ILQVSGLSMRFGGLLAVNGVALTVKEKQVVALIGPNGAGKTTVFNCLTGFYKPSGGTILL 64

Query: 81  RQQNGEAHLLERLPDFEITKKAKVARTFQNIRLFSGLTVLENLLVAQHNALMKASGYTIL 140
             Q      ++ L   +I +K  V RTFQN+RLF  +T LENLL+AQH  L   +     
Sbjct: 65  DGQP-----IQGLAGHQIARKG-VVRTFQNVRLFKEMTALENLLIAQHRHL---NTNFFA 115

Query: 141 GLLGLPAYKRAVASSIEKAKYWLEKADLVDRADDPAGDLPYGAQRRLEIARAMCTGPELL 200
           GL   P+++R+   ++E+A+YWLEK +L + A+  AG L YG QRRLEIAR M T P ++
Sbjct: 116 GLFKTPSFRRSEKEAMERAQYWLEKVNLTEFANRTAGTLAYGQQRRLEIARCMMTQPRII 175

Query: 201 CLDEPAAGLNPKESLALNTLLRSIRD-EGTSLLLIEHDMSVVMQISDHVVVLEYGQKISD 259
            LDEPAAGLNPKE+  L  L+  +R+    ++LLIEHDM +VM ISDH+VV+  G  ++ 
Sbjct: 176 MLDEPAAGLNPKETEDLKALIAYLRESHNVTVLLIEHDMKLVMSISDHIVVINQGTPLAH 235

Query: 260 GSPDHVKNDPKVIAAYLG 277
           G+P+ ++++P VI AYLG
Sbjct: 236 GTPEQIRDNPDVIKAYLG 253