Pairwise Alignments

Query, 296 a.a., ABC transporter, nucleotide binding/ATPase protein from Agrobacterium fabrum C58

Subject, 299 a.a., Lipopolysaccharide export system ATP-binding protein LptB from Azospirillum sp. SherDot2

 Score =  364 bits (934), Expect = e-105
 Identities = 185/283 (65%), Positives = 224/283 (79%), Gaps = 7/283 (2%)

Query: 6   MNMTSNTTGNTTGDTILKVEHLSMKFGGLMAINDFSFEAKRGEITALIGPNGAGKTTVFN 65
           M+   NT G  T   +L VEHL+M+FGGL+A ND SFEA+ GEITALIGPNGAGKTT+FN
Sbjct: 1   MSAPMNTVG-LTEKPLLSVEHLTMRFGGLVANNDVSFEARAGEITALIGPNGAGKTTLFN 59

Query: 66  CITGFYKPTMGMITMRQQNGEAHLLERLPDFEITKKAKVARTFQNIRLFSGLTVLENLLV 125
           C+TGFY PT+G +T+R   G+  LLER+P + I + A VARTFQNIRLFSG++VLENL+V
Sbjct: 60  CVTGFYTPTVGRLTLRHPAGKEFLLERMPGYRIAQLAGVARTFQNIRLFSGMSVLENLIV 119

Query: 126 AQHNALMKASGYTILGLLGLPAYKRAVASSIEKAKYWLEKADLVDRADDPAGDLPYGAQR 185
           AQHN LM+ASG+ I GLLGLP +++A   ++E AKYWL++  L + AD  AG+LPYGAQR
Sbjct: 120 AQHNKLMRASGFAIAGLLGLPGFRKAEHEAVELAKYWLDRVRLTEFADWEAGNLPYGAQR 179

Query: 186 RLEIARAMCTGPELLCLDEPAAGLNPKESLALNTLLRSIRD------EGTSLLLIEHDMS 239
           RLEIARAMCT P LLCLDEPAAGLNP+ES  L  +L  IRD        T +LLIEHDMS
Sbjct: 180 RLEIARAMCTEPVLLCLDEPAAGLNPRESGELAEILTFIRDVQTPQGHRTGVLLIEHDMS 239

Query: 240 VVMQISDHVVVLEYGQKISDGSPDHVKNDPKVIAAYLGVEDDE 282
           VVM+ISDHVVVL+YG+KISDG+P+HVKNDP VI AYLG ++DE
Sbjct: 240 VVMRISDHVVVLDYGRKISDGTPEHVKNDPAVIRAYLGEDEDE 282