Pairwise Alignments

Query, 372 a.a., ABC transporter, substrate binding protein (amino acid) from Agrobacterium fabrum C58

Subject, 378 a.a., branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein (braC-like) from Pseudomonas putida KT2440

 Score =  357 bits (915), Expect = e-103
 Identities = 190/368 (51%), Positives = 248/368 (67%), Gaps = 8/368 (2%)

Query: 9   VALTAMVAFGGSAW--ADVVIAVGAPLTGPNAAFGAQIQKGAEQAAKDINAAGGINGEQI 66
           +AL    A G S++  ADV I V  P+TG NAAFG Q  KGA+ AA  INAAGG+NGE+I
Sbjct: 11  LALAVATALGVSSYVQADVKIGVAGPMTGANAAFGEQYMKGAQAAADKINAAGGVNGEKI 70

Query: 67  KIVLGDDVSDPKQGISVANKFV-ADGVKFVVGHFNSGVSIPASEVYAENGILEITPAATN 125
            +V GDD  +PKQ ++VAN+ V  D V  VVGHF S  +IPASEVY E G++ ITP +TN
Sbjct: 71  VLVKGDDACEPKQAVAVANRLVDQDKVIGVVGHFCSSNTIPASEVYDEAGVIAITPGSTN 130

Query: 126 PVFTERGLWNTFRTCGRDDQQGGIAGKYLADHFKDAKVAIIHDKTPYGQGLADETKKAAN 185
           P  TERGL   FR CGRDDQQG +AG Y+ D  K  KVA++HDK  YGQGLAD TK    
Sbjct: 131 PQVTERGLSAMFRMCGRDDQQGIVAGDYIVDVLKGKKVAVLHDKDTYGQGLADATKAQLE 190

Query: 186 AAGVTEVMYEGVNVGDKDFSALISKMKEAGVSIIYWGGLHTEAGLIIRQAADQGLK-AKL 244
             GV  V+YEG+  G+KDFSA+++K++  G  ++Y+GGLH EAG ++RQ  +QGLK  K 
Sbjct: 191 KRGVKPVLYEGLTRGEKDFSAVVTKIRSTGADVVYFGGLHPEAGPLVRQLREQGLKDVKF 250

Query: 245 VSGDGIVSNELASIAGDA--VEGTLNTFGPDPTLRPENKELVEKFKAAGFNPEAYTLYSY 302
           +S DGIV++EL S AG A  V+G   TFG DP L P++K +VE+F+ AG  PE YTLY+Y
Sbjct: 251 MSDDGIVTDELVSTAGGAQYVDGVYMTFGADPRLLPDSKAVVEEFRKAGTEPEGYTLYAY 310

Query: 303 AAMQAIAGAAKAAGSVEPEKVAEALKKGSFPTALGEISFDEKGDPKLPGYVMYEWKKGPD 362
           A++QA+A A   A S + E  A+ LK     T +GE  +D KGD  +  YV+Y+W K   
Sbjct: 311 ASLQALAAAFNGAKSNKGEDAAKWLKANPVQTVMGEKKWDSKGDLTVSDYVVYQWDK--T 368

Query: 363 GKFTYIQQ 370
           GK+  +++
Sbjct: 369 GKYHQLEK 376