Pairwise Alignments

Query, 429 a.a., ABC transporter, substrate binding protein (urea/amide) from Agrobacterium fabrum C58

Subject, 421 a.a., putative Urea ABC transporter, periplasmic protein from Pseudomonas putida KT2440

 Score =  511 bits (1316), Expect = e-149
 Identities = 262/409 (64%), Positives = 315/409 (77%), Gaps = 11/409 (2%)

Query: 1   MMFRKTLSAALLGAILSTTAFHGAFAADDTIKVGVLHSLSGTMAISETTLKDAMLMLIDE 60
           M  R  + A  L A ++      +  A +TIKVG+LHSLSGTMAISET+LKD  LM I++
Sbjct: 1   MKRRSLIKALTLSASIAAMGLSWSIQAAETIKVGILHSLSGTMAISETSLKDMALMTIEQ 60

Query: 61  QNKKGGVLGKKLEAVVVDPASDWPLFAEKARQLISQDKVAAVFGCWTSSSRKSVLPVFEE 120
            N KGGV GK LE VVVDPAS+WPLFAEK+RQL++QDKVA VFGCWTS SRKSVLPVFEE
Sbjct: 61  INAKGGVNGKMLEPVVVDPASNWPLFAEKSRQLLTQDKVAVVFGCWTSVSRKSVLPVFEE 120

Query: 121 LNSILFYPVQYEGEESSRNIFYTGAAPNQQAIPAVDYLASTEG--VERWVLAGTDYVYPQ 178
           LN +LFYPVQYEGEE S N+FYTGAAPNQQAIPAV+YL S +G   +R+ L GTDYVYP+
Sbjct: 121 LNGLLFYPVQYEGEEMSPNVFYTGAAPNQQAIPAVEYLMSEDGGSAKRFFLLGTDYVYPR 180

Query: 179 TTNKILKAYLMSKGVKEEDIMINYTPFGHSDWQTIVSDIKKFGSAGKKTAVVSTINGDAN 238
           TTNKIL+A+L SKGV ++DI   YTPFGH+D+QTIV+ IKKF SAG KTAV+ST+NGD+N
Sbjct: 181 TTNKILRAFLHSKGVADKDIEEVYTPFGHADYQTIVASIKKF-SAGGKTAVISTVNGDSN 239

Query: 239 VPFYKELANQGVKAEDIPVVAFSVGEEELAGLDTAPLVGHLAAWNYFQSVDAPINAEFIK 298
           VPFYKELANQG+KA D+PVVAFSVGEEEL G+DT PLVGHLAAWNYF+SVD P+N +F+ 
Sbjct: 240 VPFYKELANQGLKATDVPVVAFSVGEEELRGIDTKPLVGHLAAWNYFESVDNPVNQKFVA 299

Query: 299 TWHAFTK------NDKRVTNDPMEAAYIGFNAWVKAVESAGTTDTDKVLDSIIGVSVPNL 352
            W A+ K       DK VTNDPMEA Y+G + W +AVE A +TD DKV +++ G S    
Sbjct: 300 DWKAYAKAKGLPGADKAVTNDPMEATYVGIHMWAQAVEKAKSTDVDKVREALAGQSFEAP 359

Query: 353 SGGYSTV-MPNHHITKPVLIGEIQADGQFEIVQQTPQVV-GDEWSDYLP 399
           SG   T+   NHH+ KPV+IGEIQ DGQF +V +T Q +    WS ++P
Sbjct: 360 SGFTLTMDKTNHHLHKPVMIGEIQDDGQFSVVWETEQPLRAQPWSPFIP 408