Pairwise Alignments

Query, 537 a.a., ABC transporter, membrane spanning protein (urea/amide) from Agrobacterium fabrum C58

Subject, 286 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score =  142 bits (359), Expect = 1e-38
 Identities = 94/295 (31%), Positives = 157/295 (53%), Gaps = 14/295 (4%)

Query: 241 YAQNVWYGLSLGSVLLLAAIGLAITFGVMGIINMAHGEMVMIGAYSTFMVQEVIRSHFPG 300
           Y   +  GL LG +  L ++GL I FG++  +N AHG   ++GAY  +    +  + +  
Sbjct: 5   YLFQILNGLGLGMIYFLISVGLTIIFGLLNFVNFAHGAFFLLGAYICYTAVSLTGNFW-- 62

Query: 301 LFDWSLAIALPVAFLVTGFVGLVMERGVIRFLYGRP-LETLLATWGISLMLQQGVRSIFG 359
                  +AL +A LV   +  V+ER +I+ +Y  P +  +L T GI+L++Q+    I+G
Sbjct: 63  -------LALLIAPLVVAALAWVIERVLIQRIYHLPHMFQILVTLGIALIIQEASVMIWG 115

Query: 360 PTNREVGSPGWMSGSFSVGYLNFTWNRVWIVCFSLSVFFALLVLLKRSAFGLQMRAVTQN 419
           P  + V  P  + G   VG   + + R++++ FS  V   L +LL+R+ FG  +RA +++
Sbjct: 116 PVGKSVAVPELLRGVLVVGDFVYPYYRLFLIVFSGLVGLGLWLLLERTRFGALVRAGSES 175

Query: 420 RRMASSMGIRTPWVDAFTFALGSGVAGLAGVALSQIDNVSPNLGQSYIIDSFMVVVFGGV 479
               S +G     + + TFALG  +AG+AGV  + +    P +G   +  +F+VVV GG+
Sbjct: 176 TETVSLLGTNIFRLFSMTFALGVALAGVAGVLFAPLRGAQPFVGPEILGVAFVVVVIGGM 235

Query: 480 GNLWGTLVGALSLGVLNKFLEPTVGAVLGKILVLVLIILFIQKRPRGLFALKGRA 534
           G+  G LVG L +GV+   L  T+      +++   + + I  RP GLF   GRA
Sbjct: 236 GSFSGALVGGLLVGVVQS-LMTTLWPQGASLMIYGAMAVVILVRPYGLF---GRA 286