Pairwise Alignments

Query, 537 a.a., ABC transporter, membrane spanning protein (urea/amide) from Agrobacterium fabrum C58

Subject, 295 a.a., branched-chain amino acid ABC transporter permease from Magnetospirillum magneticum AMB-1

 Score =  141 bits (356), Expect = 3e-38
 Identities = 86/282 (30%), Positives = 153/282 (54%), Gaps = 10/282 (3%)

Query: 248 GLSLGSVLLLAAIGLAITFGVMGIINMAHGEMVMIGAYSTFMVQEVIRSHFPGLFDWSLA 307
           GL  G+   + ++GLA+ FG++ IIN +HG + M+GA+  ++       +F GL  W   
Sbjct: 19  GLINGAFYAMLSLGLALIFGLLNIINFSHGALYMMGAFVAWLAL-----NFLGLGYWG-- 71

Query: 308 IALPVAFLVTGFVGLVMERGVIRFLYGRP-LETLLATWGISLMLQQGVRSIFGPTNREVG 366
            AL VA LV   VG+V+ER ++  LY    L  LL T+G++L+++   R  +G + +   
Sbjct: 72  -ALIVAPLVVALVGIVIERTMLCRLYKLDHLYGLLLTFGLALIIEGLFREGYGVSGQPYS 130

Query: 367 SPGWMSGSFSVGYLNFTWNRVWIVCFSLSVFFALLVLLKRSAFGLQMRAVTQNRRMASSM 426
            P  ++G +++G++     R W+V  SL +       ++++  G  +RA T+N  +  + 
Sbjct: 131 VPSALAGGWNLGFMFLPIYRGWVVVASLVLCLGTWYAIEKTKLGAYLRAGTENPTLVQAF 190

Query: 427 GIRTPWVDAFTFALGSGVAGLAGVALSQIDNVSPNLGQSYIIDSFMVVVFGGVGNLWGTL 486
           GI  P +   T+  G  +A +AGV  + I  VSP +G   II  F VVV GG+G++ G++
Sbjct: 191 GINVPLMITLTYGFGVALAAIAGVLAAPIYQVSPKMGSDLIIVVFAVVVIGGMGSIMGSI 250

Query: 487 VGALSLGVLNKFLEPTVGAVLGKILVLVLIILFIQKRPRGLF 528
           +    LG++    +         ++ +V++++ + K P GLF
Sbjct: 251 LTGYMLGIVEGLTKVFYPEAASTVIFMVMVVVLLIK-PAGLF 291