Pairwise Alignments

Query, 392 a.a., ABC transporter, membrane spanning protein (urea/amide) from Agrobacterium fabrum C58

Subject, 335 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  136 bits (342), Expect = 1e-36
 Identities = 110/366 (30%), Positives = 164/366 (44%), Gaps = 65/366 (17%)

Query: 9   ALDR-RISIAIGIILAIAVLVPASNLLLPEGSAFRIPTYIMSMLGKYLAYALLALALDLV 67
           ALDR R+ + I ++  +  ++P+  L +                   L Y L  +  +L+
Sbjct: 23  ALDRWRVPLTIAVLAVLPFVLPSQALAV-----------------NVLIYGLFTVGFNLL 65

Query: 68  WGYCGILSLGHAAFFALGGYAMGMYLMRQIGTRGVYGHPVLPDFMVFLNWKELPWFWHGF 127
           +GY G+LS GHAAFF  G Y  GM +                                GF
Sbjct: 66  FGYTGLLSFGHAAFFGTGAYLTGMAIAHL-----------------------------GF 96

Query: 128 DMFWFAALMVLVV-PGLLAFVFGWFAFRSRVNGVYLSIITQAMTYALLLAFFRNDMGFGG 186
              WF A++  +V   LL+ V G  + R+R  G+Y  ++T A+   +     +     GG
Sbjct: 97  G--WFPAMLTGIVGASLLSAVIGALSIRTR--GIYFCMVTLALAQLVYYVALQASGWTGG 152

Query: 187 NNGLTDFK----DILG-FSVQADGTRAMLFAMTAAMLALSLLIASGIVNSKFGKVLVGVR 241
            NGL  F     D++G FSV      A  + +     AL+L   S ++NS FG  +  VR
Sbjct: 153 ENGLRGFTVAKADLIGGFSVNLLNPLAKYYFIMF-FAALALWFVSRVLNSPFGAAIEAVR 211

Query: 242 DAESRVRFLGFRVENIKLFTFVVSAMMAGVAGALFVPQVGIINPGEFSPANSIEVVVWTA 301
           + E+R R  GF VE  KL +F++S  + G+AG L    + I+     S   S  VV+ T 
Sbjct: 212 ENETRARACGFDVERTKLLSFILSGALCGLAGTLSALHLSIVPLDALSVHTSSIVVMMTM 271

Query: 302 VGGRGTLIGPIIGA---LLVNGGKSYFTGAFPEFWLFALGGLFIAVTLFFPKGIVGTIQH 358
           +GG G+  GP +GA   LL+    S +T      W   +G +FI   LF PKGI G++  
Sbjct: 272 LGGAGSFFGPFVGALVFLLIEDVASLWT----THWQLIVGIVFILFVLFLPKGIWGSLIQ 327

Query: 359 YLAGRR 364
               RR
Sbjct: 328 LTRRRR 333