Pairwise Alignments

Query, 392 a.a., ABC transporter, membrane spanning protein (urea/amide) from Agrobacterium fabrum C58

Subject, 379 a.a., ABC transporter membrane spanning protein from Agrobacterium fabrum C58

 Score =  181 bits (460), Expect = 2e-50
 Identities = 117/342 (34%), Positives = 178/342 (52%), Gaps = 20/342 (5%)

Query: 48  MSMLGKYLAYALLALALDLVWGYCGILSLGHAAFFALGGYAMGMYLMRQIGTRGVYGHPV 107
           ++ + KYL Y +L +A+ L WGY GIL+LG   FF LG Y + M L     T    G   
Sbjct: 31  LNRISKYLVYGMLGVAIALTWGYAGILNLGQGLFFGLGAYMLAMSLKLSSLTSLQQGSDK 90

Query: 108 -LPDFMVFLNWKELP-------------WFWHGFDMFWFAALMVLVVPGLLAFVFGWFAF 153
            +PDFM+   W   P             + W  F       ++ +++P L+A   G   F
Sbjct: 91  PVPDFML---WNAEPGAPTELCCINKGSFLWLPFQSQSVGLVLGVLLPVLIAGALGMLVF 147

Query: 154 RSRVNGVYLSIITQAMTYALLLAFFRNDMGFGGNNGLTDFKDILGFSVQADGTRAMLFAM 213
           R R++GV++SIIT A+   + L          G NGLTD   ++   ++ D      + +
Sbjct: 148 RKRISGVFVSIITLALVLLVRLVVVDAQPVTNGFNGLTDLGWLMVGGIEFDPYSRATYYL 207

Query: 214 TAAMLALSLLIASGIVNSKFGKVLVGVRDAESRVRFLGFRVENIKLFTFVVSAMMAGVAG 273
            AA L+L+L+ A  +V ++ G +L  +RD + R R+LGF V   ++F FV+SA +AGVAG
Sbjct: 208 CAACLSLTLIGARLVVETRAGMILQAIRDDQVRARYLGFDVSLYQVFFFVISAGIAGVAG 267

Query: 274 ALFVPQVGIINPGEFSPANSIEVVVWTAVGGRGTLIGPIIGALLVN--GGKSYFTGAFPE 331
            L+V      +P     + S+ +VVW AVGGR +L+G  IGA+L+N    +   T A  E
Sbjct: 268 MLYVVVAEFASPTFMDLSFSVTMVVWAAVGGRSSLLGACIGAILINMIEAEVSETEALVE 327

Query: 332 FWLFALGGLFIAVTLFFPKGIVGTIQHYLAGRREKRVARAAA 373
            W   +G +F+ V LF P+G+ G + H +     +RV  A A
Sbjct: 328 AWKAIIGLIFVLVVLFMPRGL-GGVAHDVLRTFTRRVKPAVA 368