Pairwise Alignments

Query, 1106 a.a., Acr family transporter from Agrobacterium fabrum C58

Subject, 1032 a.a., multidrug efflux transport system - membrane subunit from Pseudomonas putida KT2440

 Score =  428 bits (1100), Expect = e-123
 Identities = 299/1051 (28%), Positives = 523/1051 (49%), Gaps = 43/1051 (4%)

Query: 1    MNFSAWSIRNPIAPLLGFALLMILGMQAFNTLPITRFPNIDVPVVAVTVTQSGASPSELE 60
            MN S   I  P+A  L    +++ G+ A+  LP++  P +D P + V     GASP  + 
Sbjct: 1    MNLSRLFILRPVATTLSMLAIVLAGLIAYKLLPVSALPQVDYPTIRVMTLYPGASPQVMT 60

Query: 61   MQVTKEIEDAVAAISGVDEIQSTVVDGQSTTTVVFRIEKPTEEAVQDTKDAIDKIRSDLP 120
              VT  +E     + G++++ ST   G S  T+ F ++   + A Q  + AI+   + LP
Sbjct: 61   SAVTAPLERQFGQMPGLEQMASTSSGGASVLTLRFNLDMNMDVAEQQVQAAINAASNLLP 120

Query: 121  ADIEVP-VVSKIDVEGQAIQTFAVSSPNMTLEELSWFVDDTIKRSLQGQSGIGKVDRYGG 179
            +D+  P V +K++     + T A+SS  M L +L+  VD  + + L   SG+G V   GG
Sbjct: 121  SDLPAPPVYNKVNPADTPVLTLAISSKTMPLPKLNDLVDTRVAQKLAQISGVGMVSIAGG 180

Query: 180  ADREVRVSLSPEKLDAYGITATEVNSQLRGTNVDLGSGRGQVGGNEQTIRTLGDTRDVSQ 239
              + VR+ ++ + L A G+   +V + +  +NV+   G          +      R   +
Sbjct: 181  QRQAVRIKVNVDALAANGLNLDDVRTLIGASNVNQPKGNFDGPTRVSMLDANDQLRSPEE 240

Query: 240  LANTTIALSNGRFVKLSELGTVTDTYQEQKSFSRFNGNPAVTFAVFRSKGASEVSVAETV 299
             AN  +A +NG  ++L ++  + D  + ++  +  N N AV   + R  GA+ + V + +
Sbjct: 241  YANLILAYNNGAPLRLKDVAEIVDGAENERLAAWANENHAVLLNIQRQPGANVIEVVDRI 300

Query: 300  AASLDQVRKNNP-DVSIQMVDDAVYFTYGNYKAALDTLIEGAILAVIVVLLFLRNWRATL 358
               L  +  N P  + + ++ D         K     L+   +L V+V  +FLR + ATL
Sbjct: 301  KGLLPSITDNLPAGLDVSVLTDRTQTIRAAVKDVQHELLIAIVLVVMVTFVFLRRFSATL 360

Query: 359  IAAVALPLSAIPTFWIMDIMGFSLNLVSFLALTLATGILVDDAIVEIENIARHIKMGKTP 418
            I ++A+PLS I TF +M + GFS+N ++ +ALT+ATG +VDDAIV +ENI+RHI+ G+TP
Sbjct: 361  IPSIAVPLSLIGTFGVMYLAGFSVNNLTLMALTIATGFVVDDAIVMLENISRHIEEGETP 420

Query: 419  YRAALEAADEIGLAVIATSFTIIAVFVPVSFMPGIPGQYFIQFGLTVAFSVFFSLAVARL 478
             +AAL+ A +IG  +I+ +F++IAV +P+ FM  + G+ F +F +T+A ++  SL V+  
Sbjct: 421  MQAALKGARQIGFTLISLTFSLIAVLIPLLFMADVVGRLFREFAITLAVAILISLVVSLT 480

Query: 479  ITPLMAAYLMRAEDAMDDHHDNDGRLMKAYTRMVT------ATTRKWWARY--LTLVGAI 530
            +TP+M A L++ E       +  GR  +A    +        +  +W  ++  LTL+ A+
Sbjct: 481  LTPMMCARLLKRE----PKEEEQGRFYRASGAWIDWLIQHYGSALQWVLKHQPLTLLVAV 536

Query: 531  AFLVASVMLLAQVPGSFLPPDDASRVTLSVELPPNATLDETDRTTTQIYHALRDINGVES 590
            A LV +V L   VP  F P  D   +    E P + +          +   +     V+S
Sbjct: 537  ASLVLTVFLYMVVPKGFFPVQDTGVIQGISEAPQSTSFAAMSERQQALSKVILQDPAVQS 596

Query: 591  V-FILGGASPKGDLELRRATVNVLLQHIDHSLLKLVVNKGLGSIPLIGQYLPKVEEKGRT 649
            +   +G       L   R  +N          LK    + + +  +I +  P+V+     
Sbjct: 597  LSSYIGVDGDNATLNSGRLLIN----------LKPHGERDVSASEVISRLQPQVDRLVGI 646

Query: 650  RPQWDVERDIFAQVRGIPDVRIIKLNDRAER-ELSFNFLSKNEKDLSDAVGILESRLRAS 708
            R        +F Q      V+ + + DR  R +  F+  S +   L+   G L   L+  
Sbjct: 647  R--------LFMQ-----PVQDLSIEDRVSRTQYQFSLSSPDADLLAQWSGKLVQALQQR 693

Query: 709  PILANVSSEGALPRPELQIRPRKDEIARLGITPQQISQTVRVATIGDIDAQLTKISLDDR 768
            P LA+V+S+      ++ +   +D  +RLGI+  QI+  +  A  G    Q++ I     
Sbjct: 694  PELADVASDLQDKGLQVYLVIDRDMASRLGISVSQITNALYDA-FG--QRQISTIYTQAS 750

Query: 769  QIPIRVQASLDTRRDLATIRALKIKTASGSLVPLYSVADIDYSEGPSSIKRNDRNRVVSI 828
            Q  + +Q+S         + ++ +K   G  V L ++A I+  +   +I    +   V++
Sbjct: 751  QYRVVLQSSDAATIGPQALESIHVKATDGGQVRLSALARIEQRQAQLAISHIGQFPAVTL 810

Query: 829  GSDVPFGTALDTSTAEFKRIVAETKLPASVRLAESGDAKVQGEMQQGFVNAMLLGLMLVL 888
              ++  G +L  +    +++  +  +P  V+    G A+         +  +L  ++ + 
Sbjct: 811  SFNLAHGASLGEAVQVIEQVQKDIGMPLGVQTRFQGAAEAFQASLSSTLLLILAAVVTMY 870

Query: 889  VVLILLFKDVIQPFTILFSLPLAIGGVAVALIITQNALSMPVLIGILMLMGIVTKNAILL 948
            +VL +L++  I P TIL +LP A  G  +AL+I+ N L M  +IGI++L+GIV KNAI++
Sbjct: 871  IVLGVLYESYIHPITILSTLPSAAVGALLALLISGNDLGMIAIIGIILLIGIVKKNAIMM 930

Query: 949  VDFAIEMRRH-GMERVHAMVEAGRKRARPIIMTSIAMSAGMLPSALGVGEGGSFRAPMAI 1007
            +DFA+E  R+ GM    A+ +A   R RPI+MT++A   G +P  L  G G   R P+ +
Sbjct: 931  IDFALEAERNQGMSPRDAIYQAALLRFRPILMTTLAALFGAVPLMLATGSGAELRQPLGL 990

Query: 1008 AVIGGIIVSTVLSLIVVPAFFLIMDDVSRLL 1038
             ++GG++VS VL+L   P  +L  D ++R L
Sbjct: 991  VMVGGLLVSQVLTLFTTPVIYLYFDRLARRL 1021