Pairwise Alignments

Query, 397 a.a., HlyD family secretion protein from Agrobacterium fabrum C58

Subject, 385 a.a., Macrolide-specific efflux protein MacA from Variovorax sp. SCN45

 Score = 86.3 bits (212), Expect = 1e-21
 Identities = 87/345 (25%), Positives = 155/345 (44%), Gaps = 27/345 (7%)

Query: 40  PSIIVAHAAKRDLVDRIIATGTIRPVDEIYVQPLVDGLSIDTLNVDIGDRVEANAILAVL 99
           P  + A   + DL + ++ATG ++ + ++ V   V G  + +L V +G  V+    LA +
Sbjct: 36  PEYLTASVQRTDLENAVLATGVLQALKQVEVGAQVSG-QLKSLKVVLGQTVKKGDWLAEI 94

Query: 100 SSDSLILQKSQLEANKAKAQAAVAQAKAQVLEAEASANDANRQRDRAAKLGQSGSGSVSQ 159
             D +I Q +      A+ QA +   +AQ L  E     A     R  ++       ++Q
Sbjct: 95  --DPVISQNTL-----AQEQAKLDNLQAQKLAKEVRIRQAQLSWTRQQEM-------LAQ 140

Query: 160 VEQTQAQAEVAAAKLNAARQAVSAGEADIKVVDAQIADIDLKLTRTGVKTPVAG-IVSAK 218
               +   E A A+L A R    + +A I+     +A     L+ T +  P+ G +VS  
Sbjct: 141 DAAAKQDMESADAELRALRADGVSLDAQIRQQRLALASAQTNLSYTRIVAPIDGDVVSIS 200

Query: 219 NAKVGAIASGAGNPLFTVIKD-GAIELVADLSETDIQKVKIGQKAYLTVAGGAEK-IEGK 276
             +   + +    P    + D   + + A +SE D+ +VK GQ  Y T+ G  +K   G 
Sbjct: 201 TLEGQTVVASFQVPTLMKLADLSTMTVKAQVSEADVVRVKAGQPVYFTILGDPDKRYYGT 260

Query: 277 VRLVSPTVDPTTRLGSVHVVLPENSPARS---GMYASAAIIV-EETNALALPLSAV---- 328
           +R V P+ +        + +    +P R+    M A  AI++ E   AL +PL+A+    
Sbjct: 261 LRAVQPSPEKINNAVFFNALFDVPNPDRTLRVDMTAQVAIMLGEAKQALVVPLTALGTRD 320

Query: 329 TSGREGSTTRKVEGDVVKQVKIETGIEDSGFIEIVSGLAAGDKVV 373
             GR+     K +  V K++ +  GI ++   +++ GL  GDKV+
Sbjct: 321 KDGRQEVRVLKADQSVEKRM-VRVGISNNFQAQVLEGLKEGDKVI 364